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CRISPRs details
NZ_CP009506_5
Flanking alignement tool
Page manual
  
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NZ_CP009506_5                                                                                                                 
top
Strain :
Methanosarcina siciliae T4/M GCF_000970085
RefSeq :
NZ_CP009506 (chromosome circular)
CRISPR id :
NZ_CP009506_5
DR consensus (37 bp) :
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
Number of repetitions :
68
Begin Position :
2390504
End Position :
2395437
2390504
AGTTTCATCCTTATTTTAATGGATCTTGCTCACGAAT
ATAGCTGCTGTTTCGATGGTTGTAATGGTTGTTAAT
2390576
2390577
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
TGCGAGGTTCGGAGAGAGTAGAGGGAAGAAAATGA
2390648
2390649
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
TATAGGCCCGTTGTACGGAGTCGGGGTACCTGTTA
2390720
2390721
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
CGGGAAAACGTACCGTTGGGTTGTTGAAACTGCAC
2390792
2390793
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
AAATCAAACGGTGCCCATTTGTCCCCCGGGAAAACA
2390865
2390866
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
TGGAATATCTTTCTCAATTCGGAAGCGAGTTCAA
2390936
2390937
GTTTTAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
AAATCATTATAATGGCCTGCCTGTAAAATCAAAGG
2391008
2391009
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
AGAGAAGACCTCGATGCCATAGACGAGATGCTATT
2391080
2391081
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
CCTTGGCAGGTTCGCAATTGAACTTGGAGCAGATGG
2391153
2391154
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
GAAATCGAAGTGGGGGAAACCGTTGGCACCCTTGT
2391225
2391226
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
ACAAGATGCCTACAATCAACGTCCACAAAGGCAAGTA
2391299
2391300
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
TTTTATCTGAACATTCGGAACATCTACATAGAATTTGT
2391374
2391375
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
TTATACCGACCTCTCCCAGGCTGTAGCCGGATTA
2391445
2391446
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
ACAGTGGTTTGATATTACCAATTCCACAGAACAAGAAGT
2391521
2391522
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
TCTATTGAATTTTGATGAAGTCGTGTACGGGAATTA
2391594
2391595
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
ATTGCTTCCTGGTCCCCGACTCGGTACCTGATGCTTG
2391668
2391669
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
GTCAATGCAGCGGCTGGGACAGATCCATGTATCTG
2391740
2391741
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
GAGGAACCATCAGATGATGAAATTGACAGCATTATTAA
2391815
2391816
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
TGTCAGGTTCGATACTTCACCTACTGATGCTTATAT
2391888
2391889
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
ATAGTCCCAGAGCTCCCTTAGAAGATCATACAGCCG
2391961
2391962
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
TCACTTGCTTTTGTATCAGACATCTTTTCCACCTTA
2392034
2392035
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
TTTTTGCAATTTTCACCGTATCACCGTAGAAATCG
2392106
2392107
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
CACATATAAACCCCATTGACCCCCGTATACTCACTA
2392179
2392180
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
AGTTCCCTCAACTCTTTATATTGATTTTTGGAGAG
2392251
2392252
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
CAATTTGTACTGCCCGGACAAAACACATCTGTACTTTT
2392326
2392327
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
TTTAGATTTTAATGATTCTCCTTCTTCGGAATCCA
2392398
2392399
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
TTTTTGATTGCTGAGTGTTCATATTCAGAATATTG
2392470
2392471
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
CAAATCCAGGTAAAAGCGTGAATGCTATGAGAAGAC
2392543
2392544
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
TTCCCATAATAAGAATATGTCCTGATTGCAATGAAG
2392616
2392617
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
ATATTCACTTACTGATAATCTGAACGAACACCCAGGGT
2392691
2392692
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
CCCTACCGACCCGGTCATCATGAGAAAACGAGAGTACC
2392766
2392767
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
CCTTGCGATATTCATGGGCGTTATGGTTCTGGCAGCTCTTA
2392844
2392845
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
ATCCCAACGCTTACCGAGTCACCTATGTTATACTTG
2392917
2392918
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
CTTTAATTTTTCTTGGGGTTGTAATCCTTCAAATTA
2392990
2392991
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
ATTGATTGGGTTTGATGTATACATATACATAAAACT
2393063
2393064
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
ATTAACTGCGGGTTAACAGCTAACAAGCGCAGACTTA
2393137
2393138
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
AGTGAAATTATCTGAGTTCCCATGAGTTCAATATCAA
2393211
2393212
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
TGGTCCGCAGATGATACTTACGCGGGGAACGGTC
2393282
2393283
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
GCTACTATTCCTGTAGATGATTTACAGGTTCTTGT
2393354
2393355
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
CTGATTGAACAGAAGAAAAAACATCCGCATATCAAAT
2393428
2393429
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
TCGCCTGTATCATCGGCGGTAGAATTCGCGACGTAG
2393501
2393502
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
GAAGAAAACGAAGAATTGCAGTGAAAAACGGATACTG
2393575
2393576
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
AACACATGACTGAATACAATACAGAATTTGAAATAC
2393648
2393649
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
CGATATGCAAATACTTTATCTTGATGCAGTTCAAAAT
2393722
2393723
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
GCCGAACTAAACGGGGGAACCTCAAACTACATCGAA
2393795
2393796
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
ATTAAGAAGATTTTGGAGGAAGATGAATGACTGAAGAA
2393870
2393871
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
GATGGAGTATCTTCTCAAGGATACAAATTTCAAATA
2393943
2393944
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
ATGATTGATGTTGCCACGGAAACGCAGAAGGAGAGAA
2394017
2394018
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
TTCTTCTATTGTGTGAGTGTCTGCGAACTTCTTAATG
2394091
2394092
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
AGAACTTATCAAAATGATAGATGAACAGCCCGTTAT
2394164
2394165
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
TGGGCTTCCTTTCGTTCTTCTTCTATATCGTATTTTT
2394238
2394239
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
GAGCTTTTGGGAGCACTTGGTGGCACTGAAGCAAG
2394310
2394311
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
TTTCTTGTATCTTCATGGTCAATTTTGGTCATTGTT
2394383
2394384
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
ACTTATTCTCTATATTCTAATACGCTAAACTCATATA
2394457
2394458
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
TTTGTGCAATCGTCTTTGATATATTAATGATTTTTA
2394530
2394531
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
TTCTCTGAGGATGATGAGGACCTTACCGAAGACGA
2394602
2394603
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
TACATGAAAGTGGATAGGGGATTTAAAAAAGGAAAAT
2394676
2394677
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
ACCTACACCGCTTCTGAGAGGTCTGTTCAATG
2394745
2394746
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
CGGGCATAGACACATTTTCGTATATCGAACGGC
2394815
2394816
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
TTTCGGAAATGTCCAGACTTGGGGCAATCAAATCAA
2394888
2394889
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
TTTGTTTTTTTCTGTCCCATAAACGAGCGTTAAGGA
2394961
2394962
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
GCAATATGATCATGATATTGACAGCCGCGAGGATA
2395033
2395034
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
TTTTTTTTCGGCCATTCGTTTCACCCATCATTTTCAA
2395107
2395108
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
CGTTCGCCTGCAAAGATAACTAACACTTACTGATATA
2395181
2395182
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
CCCGGGACTAAAGAAAGGCGGGGGCACCGGGTCAAT
2395254
2395255
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
TCCCCACTCGAGTACAGGACCGTAGACCCGCTGTAAT
2395328
2395329
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
TGATTGTAACTTTCTTCTGGGTTCCTATTTCTTCA
2395400
2395401
GTTTCAATCCTTGTTTTAGTGGATCTTGCTCACGAAT
2395437
Left flanking sequence : Till position 2390504 (length
bp)
TCAGTCACCCTTAAAAGGTGAAGTGACAAAAAACCGAATAAACTTTTAACCGTCTTGCTAACGAATGATA
AGAGACAGTTTCTCGATTTTGTGATATATT
Right flanking sequence : From position 2395437 (length
bp)
AGGGCAAAAATTTCCGTTATTTGGCCAGAAAAGGCCTGAAATCACCCCTTTTTTCGGGTCAAAATTCTTG
CTGGAAAATTATCAAACCCTTTATAAATAC
Print the CRISPR sequence : From position
bp To position
bp