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CRISPRs details
NZ_CP009514_11
Flanking alignement tool
Page manual
  
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NZ_CP009514_11                                                                                                                 
top
Strain :
Methanosarcina mazei C16 GCF_000970245
RefSeq :
NZ_CP009514 (chromosome circular)
CRISPR id :
NZ_CP009514_11
DR consensus (37 bp) :
ATTCGAGAGCAAGATCCACTAAAACAAGGATTGAAAC
Number of repetitions :
42
Begin Position :
3296823
End Position :
3299881
3296823
ATTCGTGAGCAAGATCCACTAAAACAAGGATTGAAAC
TTACAATTGATGTTTCAGGCCTTGAAGATGGCGT
3296893
3296894
ATTCGTGAGCAAGATCCACTAAAACAAGGATTGAAAC
AAATGTGATACAAATAGAGATAGATTAGATAAGTATAA
3296968
3296969
ATTCGTGAGCAAGATCCACTAAAACAAGGATTGAAAC
GATAATACCAAGCTGACAAGCTCTTAGAACTGCGA
3297040
3297041
ATTCGTGAGCAAGATCCACTAAAACAAGGATTGAAAC
GTGGAAGCGGTAAATCGGTAGACCTGCTGAAAGATAA
3297114
3297115
ATTCGTGAGCAAGATCCACTAAAACAAGGATTGAAAC
TTATTCCCTTGTATAGCTCACGCGGGAACCGTAGA
3297186
3297187
ATTCGTGAGCAAGATCCACTAAAACAAGGATTGAAAC
TAATGAGATTGTTACTATTATAAATTAATTACAATA
3297259
3297260
ATTCGTGAGCAAGATCCACTAAAACAAGGATTGAAAC
GGAAATATCAGGAAGCAAATAGGAAGCTTGAAGAGA
3297332
3297333
ATTCGTGAGCAAGATCCACTAAAACAAGGATTGAAAC
ACAAAGAAACCGGGAAGGACGAAACCCCAAAATATC
3297405
3297406
ATTCGTGAGCAAGATCCACTAAAACAAGGATTGAAAC
AAACTCATGACCGCCATGCTCGGGGATGAAAACAC
3297477
3297478
ATTCGTGAGCAAGATCCACTAAAACAAGGATTGAAAC
CTATCCTTTTGATGGATATAATCAATATGCGCCTTAA
3297551
3297552
ATTCGTGAGCAAGATCCACTAAAACAAGGATTGAAAC
AATGCAACTTATTATGGGGTATGGTGTGCTCCTGTC
3297624
3297625
ATTCGAGAGCAAGATCCACTAAAACAAGGATTGAAAC
TCTGAGAGTTTCTCCGGCTTCCGGTACTCTTGTAT
3297696
3297697
ATTCGAGAGCAAGATCCACTAAAACAAGGATTGAAAC
AACGGTGATAGAAACGGGCGAACTGGCATCCTCAA
3297768
3297769
ATTCGAGAGCAAGATCCACTAAAACAAGGATTGAAAC
CCATGTTAAATCCTCACGTTGATATCAGATATTGA
3297840
3297841
ATTCGAGAGCAAGATCCACTAAAACAAGGATTGAAAC
AGTTTTCCCTCAAACATCTGATTACCTAGGGCAG
3297911
3297912
ATTCGAGAGCAAGATCCACTAAAACAAGGATTGAAAC
TTGAAAAGGGTATTATTCGAAATATGGATTTTGGT
3297983
3297984
ATTCGAGAGCAAGATCCACTAAAACAAGGATTGAAAC
TTCTCAGGATATTCAGAATCCAACTCTAGCAGGTCAT
3298057
3298058
ATTCGAGAGCAAGATCCACTAAAACAAGGATTGAAAC
ACTTTAAGGCGGGAAGTCCCCTTCCTCGCCATCAGG
3298130
3298131
ATTCGAGAGCAAGATCCACTAAAACAAGGATTGAAAC
AATCTGAAGTGCCTCAGCTTCGGTATGATGTTGA
3298201
3298202
ATTCGAGAGCAAGATCCACTAAAACAAGGATTGAAAC
TGACTAAAATGCTTGACGGAATTATATCGGATTA
3298272
3298273
ATTCGAGAGCAAGATCCACTAAAACAAGGATTGAAAC
ATGTCGTTCCTGCCATTGACCCCTTGACACCTGAG
3298344
3298345
ATTCGAGAGCAAGATCCACTAAAACAAGGATTGAAAC
TTTTGTGTCCTGATTCTGTCGTTAAAGTGTCGGCAAT
3298418
3298419
ATTCGAGAGCAAGATCCACTAAAACAAGGATTGAAAC
TTAATCCACTCAATAGAAACCACATCTGGAAACAT
3298490
3298491
ATTCGAGAGCAAGATCCACTAAAACAAGGATTGAAAC
CAGAGCTTATCAAAGGATACGCAGAAGGGAAATA
3298561
3298562
ATTCGAGAGCAAGATCCACTAAAACAAGGATTGAAAC
ATCCAGGGATGGGCTAATGATATAGGCGTACTCATG
3298634
3298635
ATTCGAGAGCAAGATCCACTAAAACAAGGATTGAAAC
AAAAGTCAGTCCCGGCCAGCCTATGCGCTAAGACTTCA
3298709
3298710
ATTCGAGAGCAAGATCCACTAAAACAAGGATTGAAAC
TCTTTTGAGACTCGCGGAAAATGCTTCAGCTGGGGACG
3298784
3298785
ATTCGAGAGCAAGATCCACTAAAACAAGGATTGAAAC
TTTTACCGGGGATGTGACAGTCAGGGAATACGGCAT
3298857
3298858
ATTCGAGAGCAAGATCCACTAAAACAAGGATTGAAAC
TGTAAATGGTACACTCTCTGAGGAAACGGTAACAA
3298929
3298930
ATTCGAGAGCAAGATCCACTAAAACAAGGATTGAAAC
TTTTGCACCTACGCTTGAAAATTTAATAGATTATGTAA
3299004
3299005
ATTCGAGAGCAAGATCCACTAAAACAAGGATTGAAAC
TTATAGAGAGCTTTTCTTCTGTATTTCACAACTAAG
3299077
3299078
ATTCGAGAGCAAGATCCACTAAAACAAGGATTGAAAC
ATTGTGCACGTTTTTCTTTGCGTATTCGGTTTTTGCTCGGT
3299155
3299156
ATTCGAGAGCAAGATCCACTAAAACAAGGATTGAAAC
TTAGAATTAAATATTCACCAAAGTTTAGTTTTTT
3299226
3299227
ATTCGAGAGCAAGATCCACTAAAACAAGGATTGAAAC
TGGCAACAACAAAACAGAAACAGTAAAAAGCAAAA
3299298
3299299
ATTCGAGAGCAAGATCCACTAAAACAAGGATTGAAAC
TACAAATCCTGGACATTTCCAGAATATGAATTCCC
3299370
3299371
ATTCGAGAGCAAGATCCACTAAAACAAGGATTGAAAC
TACATTGGAACCCCTGCATATCATCCATTGGTTCAAGT
3299445
3299446
ATTCGAGAGCAAGATCCACTAAAACAAGGATTGAAAC
AATGTTAGCTGCCGATTCAAGAGCTGGTCCGAAA
3299516
3299517
ATTCGAGAGCAAGATCCACTAAAACAAGGATTGAAGT
CGAGAAGTAGCTTCCACTAAAACAAGGATTGAAACCTGAGGTAGTAACGATTTCTCCTTTGTTGGTAATACT
3299625
3299626
GTCGAGAAGTAGCTTCCACTAAAACAAGGATTGAAAC
AATCTTCAGGATGCTGCCTTCTAATTTAGCAAAATA
3299698
3299699
GTCGAGAAGTAGCTTCCACTAAAACAAGGATTGAAAC
TTTACAATTGAGTCCGGGAATTCGAAGTACTTCTG
3299770
3299771
GTCGAGAAGTAGCTTCCACTAAAACAAGGATTGAAAC
TTTATTCTTCCTTTCCTTTTCCTACTTGCGCTTTCCT
3299844
3299845
GTCGAGAAGTAGCTTCCACTAAAACAAGGATTGAAAG
3299881
Left flanking sequence : Till position 3296823 (length
bp)
GTATTTATAAAGGGTTTGATAATTTTCCAGCAAGAATTTTAGCCCAGAAAAAGGGCTTATTTCAGGCATT
TTCTAGCCAAATAAAGGAAATTTTTGCCCT
Right flanking sequence : From position 3299881 (length
bp)
TTGTTCTCTGAGTCCCTAAACTTTTTTAAAATTCTTCTAAAAAACAGCACCAGTAACTCTAATTCGGGAA
AAAACCGAATTCTTCGCGGCTACGTATATC
Print the CRISPR sequence : From position
bp To position
bp