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CRISPRs details
NZ_CP009514_2
Flanking alignement tool
Page manual
  
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NZ_CP009514_2                                                                                                                 
top
Strain :
Methanosarcina mazei C16 GCF_000970245
RefSeq :
NZ_CP009514 (chromosome circular)
CRISPR id :
NZ_CP009514_2
DR consensus (37 bp) :
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
Number of repetitions :
76
Begin Position :
890110
End Position :
895591
890110
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
TTGTCAATTCCGTAAAAAACGTTAAACGAAAATG
890180
890181
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
AAAAGGAACTGAAGAAGGAAAAGCAGATTCCCTTACTT
890255
890256
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
ATATTATGCCCGTTGAATGTGATTGTTTCATTGT
890326
890327
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
ATTTTCACTAACCAACAGTGTAAAATCAAAGACGA
890398
890399
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
GCAGTTAGAGAATGGACTTGTCCTTCATGTAACACTT
890472
890473
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
ATAACCGTAGAGTCCGAATATATATCGACTTTCAG
890544
890545
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
TCATAAATGGAATTAACATTACAGGTGCTGGAACCTGG
890619
890620
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
AGGTTAAGGGACTTTCGACAGCAGGAAGCTCTTTTGA
890693
890694
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
ACACTCGCGAGCAGGGAATAACCATTACCGAGAT
890764
890765
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
TGGTCAAACTGTTGGAGATGCTGAAAGAGCGTAAAA
890837
890838
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
AAACTAACGCTAAAACTAAATCTAATTAATATTGAAC
890911
890912
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
TGGAAAAATTTTTGTCCTCGGTACTCTCGTCCTTTT
890984
890985
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
ACAATCTCTTTTTGCATCATGCCCTGCAAATATAG
891056
891057
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
GTCTTTCTCTTTCTGCTTCAGTCACATCTGTAATT
891128
891129
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
CCTGACCCAGACTTTCCAAACAGCAAAGCATTAGA
891200
891201
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
CCCATCCAAACATCCCCGCTTTTTTGGACTGTTATT
891273
891274
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
ACTTTGAATGTGTAAATAGTAAATAGTGAAAGATTA
891346
891347
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
CAATGCTTCTGGAAAGCATCGGGCTTTTAATTGGC
891418
891419
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
TAAGTGTTAATGAGGGGGCAGTACAGGGAAACGA
891489
891490
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
TATCAGAGCAATTCTTATTTTCGGGGCTGCACTT
891560
891561
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
ACAAAACACGTATAACTATTTTATACTCTTCTTCAGA
891634
891635
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
GGAATCATTTTTACCGTTATCGTGGTCCTGGTGCTCT
891708
891709
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
TCGAGGTGAACACTGAAAAACTGAAAGAATATTGT
891780
891781
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
TGCTGTCGGGCATGAAGCAGAACTTAGAACAGATCTT
891854
891855
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
GTAACTTCTCGGTTTTTTTCACATTCTCCCCGTAA
891926
891927
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
ATTACACTCTTCGATCTAATGAAGAATCAGAAAG
891997
891998
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
TGACTCAGGATATTCATGTTAAAAATATTGAAAG
892068
892069
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
TGAAAAAACTCGAAACTGAAATGGGGAAGGCGTTAT
892141
892142
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
ACATGGTTATGGAAAGCTTCGATGTCCCTGACGC
892212
892213
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
ACACGACATCGTTTGGAGGGATCCATAGCACATAATT
892286
892287
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
TTGCAAGGGCTTAAAGGTGATCTTGTATGGTAGG
892357
892358
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
TTTTCCCTCCAACGTTTTAAGGGGCTTACTGCCCCT
892430
892431
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
TCATGTGGCTATATTCAACATCAAATTCCTTTTTC
892502
892503
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
AATCTCTAAAAATCCATATCTAACATGCAGCTATAT
892575
892576
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
TCCGCCTCACTCGCTTGGCCTTATGATGATTACA
892646
892647
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
ATGCGATCCGCCAAAAGAGAAAGCTGTTCAGGA
892716
892717
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
ACTGTTGAATTAATTTCGATGTCGTTTTCTGAAAAAA
892790
892791
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
TTTCACACTCTCCAAATAAAAAAGGGAAATCTGA
892861
892862
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
AAAACAATATCATAACGAACACACAGAAAAGAAACA
892934
892935
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
ATTGGTCAGTCCGATACTGAAATAGAAAATATTGAAA
893008
893009
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
CGGCGACTCCGGTAAATTCATACAAAGTTGTAGAAG
893081
893082
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
TAGTAGTATGACAATATAGAGTATGTACTAGGGCGGT
893155
893156
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
TATACATTGTTAGCGTTAATAGAATCTATGGCAGA
893227
893228
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
TTATTATGTCAGTACATCCCTTCCTTAGCACCATC
893299
893300
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
TGCACATGTTTTCAAAGACACCATGAATCCATTGAC
893372
893373
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
TAGTAGTATGACTAATACTATGTACTGATAAAAG
893443
893444
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
GATTTTTCTACCCCTAGCTGCCTCGACTCTCCAAT
893515
893516
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
CGCCAAGCTGCACGGCATTGCATTAGAACCTCTTGTAG
893590
893591
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
AAGATCAGAACAGGAGAAATCTTAAATGGTAGGA
893661
893662
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
ATTCTATCTGCTTCTTCAGTGTTTCCATTCTTAAGCT
893735
893736
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
TCAATCATAAATATCACCTCATCCAAGAATCAAACT
893808
893809
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
ATACCCTCCTTCTCCTTACTGTATCGAATGAGTTA
893880
893881
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
ATTTCGCACCTGCCTTAGAAGTCACGTTTTTATAT
893952
893953
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
TTAAAGCGTTTGTGAAGGTGAGCTAATGATTGAAA
894024
894025
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
ATGTAATGAGGGATATCTATATCAGAGCAATTCTGA
894097
894098
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
GCTTCCTTTTCCTCAGTCTCTTCTATTTCCTGCTGT
894170
894171
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
TAAACCATGACCTGGGAAAACGAAAACACTTACA
894241
894242
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
TGTAGATGGAGTACTTGAAGGAACCGCAACGTCTGCA
894315
894316
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
CGATAGTGGCAGACGGAATAATGAGAGCGGTAAAT
894387
894388
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
TGGTCTGGATCGAAGATAAAATCATGTATGACGGGA
894460
894461
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
CAGAAACATAAGCAAACGTTTCCCCTAATTCTATTTGATT
894537
894538
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
TTACATTGCCGTTGATATCGATCCGCGTGAGAGTAGG
894611
894612
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
AGCGCGGGCATCCTGATATGACCGCAGGAGAAG
894681
894682
ATTCGCGAGCAAGGTCCATTAAAACAAGGATTGAAAC
TGCGAGAGTGTTATGGCGACGATCAAAAGCGAAAG
894753
894754
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
TTGCCTCAATAGCTACTATCCGCGACCATATGAAC
894825
894826
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
ATTCCCGTTCCGGCATGGATACGGGATGAGCTTAATTT
894900
894901
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
TGAACTACGCGGCGGCGGTTCACGAAATCCCGATGA
894973
894974
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
AAATTATAAAGTTAACAGCGTTAACTTTATAATA
895044
895045
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
TGACAAGTCAGTTATCCAGGCAAGCAGAAAACTCCGT
895118
895119
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
TCAGGGGCGGTGAAAGGAGCAACCGGGGCAAATCA
895190
895191
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
TTAGAAGCGAAATAGACAAGCTCAGGGACGGTTC
895261
895262
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
TTCAAGAAGTTGGAAAAGAAAATTTGAATATGGGT
895333
895334
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
ACTGAATCCCTGATACTTTTGAGCTCTTTTTTCATGGT
895408
895409
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
ATCTGTAGTCATTTTAGATATACCTCGCAAACATT
895480
895481
ATTCGCGAGCAAGATCCATTAAAACAAGGATTGAAAC
TTTCATTTTTTGTGACACTTATTGTTATATTGTCATA
895554
895555
ATTCGTGAGCATGATCCATTAAGAGCCTATTCGAAAA
895591
Left flanking sequence : Till position 890110 (length
bp)
GTATTTATAAAGGGTTTGATAATTTTCCAGCAAGAATTTTAGCCCTGAAAAAGGGCTCATTTCAGGCCTT
TTCTGGCCAAATAACGGAAATTTTTGCCCT
Right flanking sequence : From position 895591 (length
bp)
GTGTTGTGACCTGTGTAGATGTCCGACATTAATATTTCGAAACTTCTACAACAGCCAATATATATCCTCA
GTGCGGTAAAGAGTCTTAGAGACATCTGGA
Print the CRISPR sequence : From position
bp To position
bp