CRISPR details
Home
About CRISPRs
News
FAQs
Help
Contact Us
Examples
IGM
Navigation
Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison
Other Tools
CRISPRcompar
CRISPRtionary
CRISPRfinder
GPMS Links
GPMS Team
Tandem Repeats DB
MLVA Web Service
CRISPRs details
NZ_CP009561_2
Flanking alignement tool
Page manual
  
Home Page
NZ_CP009561_2                                                                                                                 
top
Strain :
Salmonella enterica subsp. enterica serovar Newport str. CVM N18486 GCF_000272815
RefSeq :
NZ_CP009561 (chromosome circular)
CRISPR id :
NZ_CP009561_2
DR consensus (29 bp) :
CGGTTTATCCCCGCTGGCGCGGGGAACAC
Number of repetitions :
13
Begin Position :
187870
End Position :
188629
187870
ACGGCTATCCTTGTTGGCGCGGGGAACAC
ACGGCAACGGATGCGACCGCCAGCGCGATCC
187929
187930
CCGGTTTATCCCCGCTGCGCGGGGAACAC
TTGATGAAAGTTCATCTAATAATGATTGTGCT
187990
187991
GGGTTTATCCCCGCTGGCGCAGGGAACAC
GAACCGCTTTTATTTTTAGACATAGAGCACCG
188051
188052
CGGTTTATCCCCGCTGGCGCGGGGAACAC
GCCACCCGGACAACAAAATGAATCCCGATGAT
188112
188113
CGGTTTATCCCCGCTGGCGCGGGGAACAC
AAACTCTGGGCGCTCGAATGGCTGTCCTATTG
188173
188174
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TGGCGGTGTAAATTTTTACGTTTTTCATATCT
188234
188235
CGGTTTATCCCCGCTGGCGCGGGGAACAC
GAGACTTTTCACACTGATAATGTTGTTATTTT
188295
188296
CGGTTTATCCCCGCTGGCGCGGGGAACAC
GTTGTCGCGGTAGTATTTAGTCGAAAGCATGA
188356
188357
CGGTTTATCCCCGCTGGCGCTGGGAACAC
ACGGCCTGATTTAGAGTTAAACATGGTCACGC
188417
188418
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TACGGGTTGTACCATGCCACTGGCGTTTTGTG
188478
188479
CGGTTTATCCCCGCTGGCGCGGGGAACAC
ATGGCGTGTCTCGATTGCGCGCTGCCGCACTG
188539
188540
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TTCCCATTTAGCGAGTTCTTTTGCCGCCAGCA
188600
188601
CGGTTTATCCCCGCTGGCGCGGGGAACAC
188629
Left flanking sequence : Till position 187870 (length
bp)
CATGGCCTTCTCCTGTATAAAAGCCTCCCCGGGAAAACGCGGCCTTTTTACTTTACAGGTTTGTAGCTGC
CATTACTGGTACACAGATTATGATTATGCA
Right flanking sequence : From position 188629 (length
bp)
ACTAAACGGATATCATTGTTTATAAACTACTTTTTATCAGCATTACATTCTACCAACATAATCGCAACAA
TTTAAATTATTAAAGAACAGCTAATTTGCT
Print the CRISPR sequence : From position
bp To position
bp