Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP009715_4                                                                                                                 top


Strain : Yersinia pestis Pestoides F GCF_000834315 RefSeq :NZ_CP009715 (chromosome circular)
CRISPR id : NZ_CP009715_4
DR consensus (28 bp) : TTTCTAAGCTGCCTGTGCGGCAGTGAACNumber of repetitions :7
Begin Position : 3526117 End Position : 3526506

3526117TTTGATTATTGCCTGTGCGGCAGTGAACTCAGGGGACTGGCGAACAATGTCTTTCATGAT3526176
3526177TTTCTAAGCTGCCTGTGCGGCAGTGAACGAAAAGGTAAGATGGGCAAGCTTCTAGTAGTT3526236
3526237TTTCTAAGCTGCCTGTGCAGCAGTGAACATTATCTGAATGGCATTTTCTTTGGCGCAGAT3526296
3526297TTTCTAAGCTGCCTGTGCGGCAGTGAACTCGCCATTCCGTGAACCTGAGCGCGTTCGCGA3526356
3526357TTTCTAAGCTGCCTGTGCGGCAGTGAACATATTCTCGAGCGATAGCAATAGCCATTCCAC3526416
3526417TTTCTAAGCTGCCTGTGCGGCAGTGAACTTATCCGTGACCGACTCAAATACACGCTGGAACG3526478
3526479TTTCTAAGCTGCCTGTGCGGCAGTGAAC3526506
Left flanking sequence : Till position 3526117 (length bp)
AAGTCAGTAATAAAAGATGCCATTCTCCCTGTTGTCAGTTACAAAATGCGCTTCCGCTCGCAATTTTGCT
CCCCAAATAGCATCAGCACATGGCCCAGGA
Right flanking sequence : From position 3526506 (length bp)
AGTAAGATAATACGATAACATCCTGTTTGTAAAATACTTATTTCGCTAATGGGGAAAAAACCCTTTTTTT
AGACCACCGATAACCACAATGTAAAATCAA
Print the CRISPR sequence : From position bp To position bp