Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP009723_2                                                                                                                 top


Strain : Yersinia pestis GCF_000834335 RefSeq :NZ_CP009723 (chromosome circular)
CRISPR id : NZ_CP009723_2
DR consensus (28 bp) : GTTCACTGCCGCACAGGCAGCTTAGAAANumber of repetitions :9
Begin Position : 1159714 End Position : 1160222

1159714GTTCACTGCCGCACAGGCAGCTTAGAAACCGCAGCTATCACGCCAGAGATTCAGGCATTGA1159774
1159775GTTCACTGCCGCACAGGCAGCTTAGAAACTGATGGGTAACTTTAATCCCAAATTCTTTTT1159834
1159835GTTCACTGCCGCACAGGCAGCTTAGAAATGTTAAATCGTCGCCTAAATTTGTTTGACCGA1159894
1159895GTTCACTGCCGCACAGGCAGCTTAGAAAGTGGAATGGCTATTGCTATCGCTCGAGAATAT1159954
1159955GTTCACTGCCGCACAGGCAGCTTAGAAATCGCGAACGCGCTCAGGTTCACGGAATGGCGA1160014
1160015GTTCACTGCCGCACAGGCAGCTTAGAAAATCTGCGCCAAAGAAAATGCCATTCAGATAAT1160074
1160075GTTCACTGCTGCACAGGCAGCTTAGAAAAACTACTAGAAGCTTGCCCATCTTACCTTTTC1160134
1160135GTTCACTGCCGCACAGGCAGCTTAGAAAATCATGAAAGACATTGTTCGCCAGTCCCCTGA1160194
1160195GTTCACTGCCGCACAGGCAATAATCAAA1160222
Left flanking sequence : Till position 1159714 (length bp)
TTGATTTTACATTGTGGTTATCGGTGGTCTAAAAAAAGGGTTTTTTCCCCATTAGCGAAATAAGTATTTT
ACAAACAGGATGTTATCGTATTATCTTACT
Right flanking sequence : From position 1160222 (length bp)
TCCTGGGCCATGTGCTGATGCTATTTGGGGAGCAAAATTGCGAGCGGAAGCGCATTTTGTAACTGACAAC
AGGGAGAATGGCATCTTTTATTACTGACTT
Print the CRISPR sequence : From position bp To position bp