Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP009768_1                                                                                                                 top


Strain : Salmonella enterica subsp. enterica serovar Enteritidis GCF_001305235 RefSeq :NZ_CP009768 (chromosome circular)
CRISPR id : NZ_CP009768_1
DR consensus (29 bp) : CGGTTTATCCCCGCTGGCGCGGGGAACACNumber of repetitions :9
Begin Position : 3840943 End Position : 3841459

3840943GTGTTTATCCCCGCTGACGCGGGGAACACTATTTATAAGCGTGTCATCTATGCAACCCAAC3841003
3841004CGGTTTATCCCCGCTGGCGCGGGGAACACACCTGCCCGACCCAATAAGGGGGCCCTCGTGA3841064
3841065CGGTTTATCCCCGCTGGCGCGGGGAACACGGCCGCTGGTCAAATTCCCAATCTGAGCAATC3841125
3841126CGGTTTATCCCCGCTGGCGCGGGGAACACATAGCCCCGGCAGCGATAGCTAAACCAGTTCC3841186
3841187CGGTTTATCCCCGCTGGCGCGGGGAACACGCCTCAAAATCTCTCGGTGAGATGTAAGCGTC3841247
3841248CGGTTTATCCCCGCTGGCGCGGGGAACACACCAGTGGTCAGCGGCGGATGAATTTGCCCTG3841308
3841309CGGTTTATCCCCGCTGGCGCGGGGAACACGAGAATGCTCATGCGCGTGAGCGCCATATATT3841369
3841370CGGTTTATCCCCGCTGGCGCGGGGAACACAGGCGGACCGAAAAACCGTTTTCAGCCAACGT3841430
3841431CGGTTTATCCCCGCTGGCGCGGGGAACAC3841459
Left flanking sequence : Till position 3840943 (length bp)
GGCGAATTGAGCGCCGTAGCCGCGATGTAGTACGGATAATGCTGCCGTTGGTAAAAGAGCTGGCGAAGGC
GGAAAAAACGTCCTGATATGCTGGTGAAAC
Right flanking sequence : From position 3841459 (length bp)
ACTAAAACTATATATTTGTTCTAAAAGCCCTTTTTTACTACATAACAAACTACCAACGGTAAGATAACAA
TTCCTTATCATTAAAGAACATTCAACTTAT
Print the CRISPR sequence : From position bp To position bp