Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP009991_3                                                                                                                 top


Strain : Yersinia pestis GCF_000834885 RefSeq :NZ_CP009991 (chromosome circular)
CRISPR id : NZ_CP009991_3
DR consensus (28 bp) : GTTCACTGCCGCACAGGCAGCTTAGAAANumber of repetitions :5
Begin Position : 3551240 End Position : 3551509

3551240GTTCACTGCCGCACAGGCAGCTTAGAAACTGATACAATCATCCTATTTGTCCTATCCAGAA3551300
3551301GTTCACTGCCGCACAGGCAGCTTAGAAAGACAAGAACCGAATCTTTCGCCGTGCCGTAAA3551360
3551361GTTCACTGCCGCACAGGCAGCTTAGAAACCGAAATCATCAGATGTAATTAAGATTTTTGCT3551421
3551422GTTCACTGCCGCACAGGCAGCTTAGAAAAGACTGATGCAAGATGGCGGTATGCGTACAGA3551481
3551482GTTCACTGCCGCACAGGCAGCTTATAGA3551509
Left flanking sequence : Till position 3551240 (length bp)
TGATTTTATATCCTGCTTACCGAGGGTTAAAAAAAATCATTTTTTACCCTTTGGCGAAAGAATTATTTTA
CAAACAGTCTGTTACCCGTATTATCTTACT
Right flanking sequence : From position 3551509 (length bp)
GGGTCACTGTCTGTGCGCCAGCGCGGCCCCGGCCTGCGCCTCCTGCTGGTAGGCCAACGCCACGACCAGC
GACTGCACTAGACAGAGCGTGGCTGATTGA
Print the CRISPR sequence : From position bp To position bp