Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP010122_4                                                                                                                 top


Strain : Escherichia coli GCF_001900535 RefSeq :NZ_CP010122 (chromosome circular)
CRISPR id : NZ_CP010122_4
DR consensus (29 bp) : GTGTTCCCCGCGCCAGCGGGGATAAACCGNumber of repetitions :14
Begin Position : 1576411 End Position : 1577232

1576411GTGTTCCCCGCGCCAGCGGGGATAAACCGATTAACGCGGCCCGCCTCTGCGTTGGCGTGAA1576471
1576472GTGTTCCCCGCGCCAGCGGGGATAAACCGCGCGTTTCTGGAACCGTAATTTGCTGCGGTAT1576532
1576533GTGTTCCCCGCGCCAGCGGGGATAAACCGCTATTGGCCTCACTGCCACCGCAGTTAATACT1576593
1576594GTGTTCCCCGCGCCAGCGGGGATAAACCGGTGGTTACCTAGTTGCTATGTGTTCGTGACAA1576654
1576655GTGTTCCCCGCGCCAGCGGGGATAAACCGCGCCGAGCGTGGCGCGGATATAAAAAAGCCCC1576715
1576716GTGTTCCCCGCGCCAGCGGGGATAAACCGGAATATCGGGTGCCAGCCTGGACGCTGGCCGA1576776
1576777GTGTTCCCCGCGCCAGCGGGGATAAACCGACGCGAATCGGCGGTTTTGAGCGGGTAGCAAA1576837
1576838GTGTTCCCCGCGCCAGCGGGGATAAACCGGCAAACAGCTAACCACCGCCGGGGCGGTTTCC1576898
1576899GTGTTCCCCGCGCCAGCGGGGATAAACCGCGATGATGTAATAATTAGAGCAGAATCCAGTT1576959
1576960GTGTTCCCCGCGCCAGCGGGGATAAACCGCAAAATTTAAAATCATTTAAGCTTGTAAAACC1577020
1577021GTGTTCCCCGCGCCAGCGGGGATAAACCGGGTACACGGATATTCTGTCTAAAAGTTAACTA1577081
1577082GTGTTCCCCGCGCCAGCGGGGATAAACCGGCAATTTGTTGTCCGCGATCCGGTACGCGCGT1577142
1577143GTGTTCCCCGCGCCAGCGGGGATAAACCGCGGCTATGGAATTTATGGAGAAGTTTGGTTTT1577203
1577204GTGTTCCCCGCGCCAGCGGGGATAAACCG1577232
Left flanking sequence : Till position 1576411 (length bp)
ATAAGTTAGACGTTCTTTAAAAATAAGGAAATGTTTGAATTTAGTTGGTAGATTGTTGATGTGGAATAAA
TTTGTTTAAAAACAGATATGTATGCTTAGT
Right flanking sequence : From position 1577232 (length bp)
GGCGCACTGGATGCGATGATGGATATCACTTAGAATTCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCAT
TTTCAAACCCATCAAGACGCCTTCGCCAGC
Print the CRISPR sequence : From position bp To position bp