Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP010228_1                                                                                                                 top


Strain : Escherichia coli GCF_001900905 RefSeq :NZ_CP010228 (chromosome circular)
CRISPR id : NZ_CP010228_1
DR consensus (29 bp) : GAGTTCCCCGCGCCAGCGGGGATAAACCGNumber of repetitions :5
Begin Position : 543280 End Position : 543552

543280GAGTTCCCCGCGCCAGCGGGGATAAACCGGACTCGGGTGGCAAGTATTCCCCGAATGCTGG543340
543341GAGTTCCCCGCGCCAGCGGGGATAAACCGACGCTGATTTGATGGGGGCTGGTGCAGGAGAT543401
543402GAGTTCCCCGCGCCAGCGGGGATAAACCGTTTCAGCAGTTCAGCGTAACACCGACGGTCAC543462
543463GAGTTCCCCGCGCCAGCGGGGATAAACCGCCCGGAATGCATTCTGAAGGTTTGCTGTATAT543523
543524GAGTTCCCCGCGCCAGCGGGGATAAACCA543552
Left flanking sequence : Till position 543280 (length bp)
ACTCTTTAACATAATGGATGTGTTGTTTGTGTGATACTGTAAAGTTGGTAGATTGTGACTGGCTTAAAAA
ATCATTAATTAATAATAGGTTATGTTTACA
Right flanking sequence : From position 543552 (length bp)
CCATATAACCCGTTATCTCTTTCTCAAGTTTTTATATTAGCAGTACTTGTAATAAGCAACATATCCACGT
AACACCTCATGTTCAAAATAGTTCTCCATG
Print the CRISPR sequence : From position bp To position bp