CRISPR details
Home
About CRISPRs
News
FAQs
Help
Contact Us
Examples
IGM
Navigation
Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison
Other Tools
CRISPRcompar
CRISPRtionary
CRISPRfinder
GPMS Links
GPMS Team
Tandem Repeats DB
MLVA Web Service
CRISPRs details
NZ_CP010888_12
Flanking alignement tool
Page manual
  
Home Page
NZ_CP010888_12                                                                                                                 
top
Strain :
Clostridioides difficile GCF_001577795
RefSeq :
NZ_CP010888 (chromosome circular)
CRISPR id :
NZ_CP010888_12
DR consensus (29 bp) :
TTTTACATTCCATATAGTTAATCTAAAAC
Number of repetitions :
11
Begin Position :
3074062
End Position :
3074743
3074062
ATTTTGAATCCACATAGTTAATCTAAAAC
ACAATTATTAATTGTTTTATTATTGAAATCACAGCA
3074126
3074127
ATTTACATTCCATATAGTTAATCTAAAAT
GTACCCTGCTAAATTTAATTTATACCGTTGTAGCCG
3074191
3074192
ATTTACATTCCATATAGTTAATCTAAAAC
AAGCATATACACATGTCAGAAGATATTTATAAAAGGA
3074257
3074258
TTTTACATTCCATATAGTTAATCTAAAAC
AAGACTTAACACAGTAACTAAACTGTACATAATTGG
3074322
3074323
TTTTACATTCCATATAGTTAATCTAAAAC
GATATAATAATGAAACCTTTTTTTAAACTTATTTTCTT
3074389
3074390
TTTTACATTCCATATAGTTAATCTAAAAC
GACAGCGAACAAGAGGTTTGGGAGGATGAAAAAAGT
3074454
3074455
TTTTACATTCCATATAGTTAATCTAAAAC
AAATTTTGTAGTAAATTTCTTCATAGCGTCAAAAAT
3074519
3074520
TTTTACATTCCATATAGTTAATCTAAAAC
TTAAAAATTTTTTTAACTTATATTTTGAGTCCAA
3074582
3074583
TTTTACATTCCATATAGTTAATCTAAAAC
AAACTTCTCATATTCCTGACAATTGTTATTTTACGAA
3074648
3074649
TTTTACATTCCATATAGTTAATCTAAAAC
TATTCTTGATATTACTTATTATATGCTCCCGAGTCAG
3074714
3074715
TTTTACATTCCATATAGTTAATCTAAAAC
3074743
Left flanking sequence : Till position 3074062 (length
bp)
TAGGTTTTTACTAACTTTTTCTAATTATTTTACCCAACCGACCAATTTTGAGCAGAATAAAAGCACCTAC
ATATTTGTAAGTGCTTTCTTTGTTTATTTA
Right flanking sequence : From position 3074743 (length
bp)
CCCAAAATAAACTTAGCATTTCCAATACCTACATATATACAATACTCTTAAAATTGCAGTGAGCGGGCAA
TAGTGCAATTGATAACACTTATCACGCACC
Print the CRISPR sequence : From position
bp To position
bp