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CRISPRs details
NZ_CP010888_14
Flanking alignement tool
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NZ_CP010888_14                                                                                                                 
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Strain :
Clostridioides difficile GCF_001577795
RefSeq :
NZ_CP010888 (chromosome circular)
CRISPR id :
NZ_CP010888_14
DR consensus (26 bp) :
TTACCATCTATTTGTTGCCATCCTGT
Number of repetitions :
6
Begin Position :
3554826
End Position :
3555151
3554826
TTCCCATCTATTTTTTGAGAACCAGT
TAGCATCTTTCCATCTTTGTCTAAATAGTAAGAC
3554885
3554886
TTACCATCTATTTGTTGCCATCCTGT
CTGCATTATTCCTGTTTTGTCAAAGTAATACTTA
3554945
3554946
TTACCATCTATTTCTTGCCATCCTGT
TACTGCTAAACCATCAGATCCTAGATAGTATTTC
3555005
3555006
TTTCCATTCTTTTCTTGCCATCCTGT
TTGCATTACTCCATCTGAGTTAAAGTAATAAGTT
3555065
3555066
TTTCCGTCTATTACTTTCCATCCAGA
TACTCTTGCTCCATCAGTTCCTAAATAATATTTT
3555125
3555126
TTGTTATTAATTGTTTTCCATCCTGT
3555151
Left flanking sequence : Till position 3554826 (length
bp)
TCCAACTGAACTTATCTTTTTAGCTGTATCAAATCTATTTGCACCTATAATTGTATCCCATGTAGGATTT
ATAGTTCCATCTTCATTAAAAGTATAATCT
Right flanking sequence : From position 3555151 (length
bp)
TTGCATTACTCCTGAAGCATCAAAGTAATACATTTTTCCATTTACTTTTAGCCAACTATTCTTTTGGTAT
GTTCCATCAGATTTTACATAATACTTCTTA
Print the CRISPR sequence : From position
bp To position
bp