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CRISPRs details
NZ_CP010967_1
Flanking alignement tool
Page manual
  
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NZ_CP010967_1                                                                                                                 
top
Strain :
Thermotoga maritima GCF_000978535
RefSeq :
NZ_CP010967 (chromosome circular)
CRISPR id :
NZ_CP010967_1
DR consensus (30 bp) :
GTTTCAATAATTCCTTAGAGGTATGGAAAC
Number of repetitions :
41
Begin Position :
412
End Position :
3105
412
GTTTCAATACTTCCTTAGAGGTATGGAAAC
TCTGTGATCTGTTAACGGGGACATCCACACCCAAAATC
479
480
GTTTCAATACTTCCTTAGAGGTATGGAAAC
ACTGTCGGAGATGTTCTGCTGTGCATCGTCGAGAGTTT
547
548
GTTTCAATACTTCCTTAGAGGTATGGAAAC
ATATAAGCCTTTTCCAGTCTTCGGGGGACATTTCCCA
614
615
GTTTCAATACTTCCTTAGAGGTATGGAAAC
ATGCGAGCACTGTCCTCTCCAACATCCATATACACCG
681
682
GTTTCAATACTTCCTTAGAGGTATGGAAAC
CATACTCCAGCATCAAGCAACTTGCTGGCGAAATTTC
748
749
GTTTCAATACTTCCTTAGAGGTATGGAAAC
ATCCATATCAACGTTGCATATTCTCGTTGATAAAAA
814
815
GTTTCAATACTTCCTTAGAGGTATGGAAAC
GCGACAAGCCCACGTTCAGGCACGAGGTGTTCCCTGA
881
882
GTTTCAATACTTCCTTAGAGGTATGGAAAC
AAGTTTTACCTTTTCTCAGACAACTTCAACTGGAAAA
948
949
GTTTCAATACTTCCTTAGAGGTATGGAAAC
TCGATTATTTCTTTTACAAAGACATGCGATCATACAA
1015
1016
GTTTCAATACTTCCTTAGAGGTATGGAAAC
TATACGTTGTAGAAATCGCAAAGGTGGTGATGTTA
1080
1081
GTTTCAATACTTCCTTAGAGGTATGGAAAC
TCTCGAATCCGATATAATCATATTTCCTTATTATAT
1146
1147
GTTTCAATACTTCCTTAGAGGTATGGAAAC
CCGCATCTCGTAGGTATTGCTTGCCTTCTGTTCCCTT
1213
1214
GTTTCAATACTTCCTTAGAGGTATGGAAAC
TAAACTTGTAAATCCTTTTGAAGACTTAGAACAAC
1278
1279
GTTTCAATACTTCCTTAGAGGTATGGAAAC
GAAACGCCCGCAAACGCTCATCACAAGCCCGTTTCC
1344
1345
GTTTCAATACTTCCTTAGAGGTATGGAAAC
TTGAGTATAAAATCTTCTTCTGATAATGACAAAACA
1410
1411
GTTTCAATACTTCCTTAGAGGTATGGAAAC
TGCTTCTATTACTCTTTGTAGCACGTTCGTGAACTCA
1477
1478
GTTTCAATACTTCCTTAGAGGTATGGAAAC
TCGATAATCTCAGATGCCTCGCCTCAATTTCAATTG
1543
1544
GTTTCAATACTTCCTTAGAGGTATGGAAAC
CTCCACAATGAAAAGAATAGATGGTAAGGTGTGCTT
1609
1610
GTTTCAATACTTCCTTAGAGGTATGGAAAC
CTACTATCTTCTATATATATATTTTTGTTTTTGTTTT
1676
1677
GTTTCAATACTTCCTTAGAGGTATGGAAAC
CTATTTCCCTCTGCCGTCTCTTCGAAATGATCACCTCT
1744
1745
GTTTCAATACTTCCTTAGAGGTATGGAAAC
TGTGAAGGCGTATGAGGTGGAGGATATTCCTGCAATTG
1812
1813
GTTTCAATAATTCCTTAGAGGTATGGAAAC
TTTTTCCAGCATCTTCTTCACGAAGTACGTCTTCATC
1879
1880
GTTTCAATAATTCCTTAGAGGTATGGAAAC
GCGATGTTGCGAGAACGATGAAAGATTTGTATGAAC
1945
1946
GTTTCAATAATTCCTTAGAGGTATGGAAAC
TTGTCGAACTCTTTGGTACTTCCATCCGGATACATCT
2012
2013
GTTTCAATAATTCCTTAGAGGTATGGAAAC
GAGTAGTACAGAGGAGAGAGATGCAGATATCCACGAC
2079
2080
GTTTCAATAATTCCTTAGAGGTATGGAAAC
CTCGATCGCTTGTGGTATCTCTGTCTGTGCGAGCT
2144
2145
GTTTCAATAATTCCTTAGAGGTATGGAAAC
TTGTGATGATGTCGCCAAGCTTTAGGGGGACATCTGTTT
2213
2214
GTTTCAATAATTCCTTAGAGGTATGGAAAC
CTGATCTAGCCGTCCGGCCAGTCACAGGTTGAGATA
2279
2280
GTTTCAATAATTCCTTAGAGGTATGGAAAC
ATGTATTGCAAGGAAAAGCAAAAATAAGATTCGACAG
2346
2347
GTTTCAATAATTCCTTAGAGGTATGGAAAC
TCGAACTCGAAGAGGCCTATGCACCTGTCCAGCCTAT
2413
2414
GTTTCAATAATTCCTTAGAGGTATGGAAAC
ATCCTCCTTACTTTGGCCGACACCGTTCGTCCGTTT
2479
2480
GTTTCAATAATTCCTTAGAGGTATGGAAAC
CTTCAAGCCATACTAATATTGCGTATTCTCTTCTCA
2545
2546
GTTTCAATAATTCCTTAGAGGTATGGAAAC
AAAAGCCTACGAAGGGCTTCGAGTACCACCAGCTTTT
2612
2613
GTTTCAATAATTCCTTAGAGGTATGGAAAC
GGGCTGAAAAATTTCCCATTTCGTTTTATCACCTCCT
2679
2680
GTTTCAATAATTCCTTAGAGGTATGGAAAC
CAAGGGGAGGATGATACTGAATGGATAGGGGAACTCA
2746
2747
GTTTCAATAGTTCCTTAGAGGTATGGAAAC
ACCATTCATCCATTACAACCTCTTTGCCTCTAATTT
2812
2813
GTTTCAATAGTTCCTTAGAGGTATGGAAAC
TGATGTCTTCCCATTGTTTCGTGTTGTCAAACACCT
2878
2879
GTTTCAATACTTCCTTAGAGGTATGGAAAC
TAAAGCATACGCTCCAAAACGTGAACAAATTCTCTCA
2945
2946
GTTTCAATAATTCCTTAGAGGTATGGAAAC
AGTTGGACGACGATCTTGTATTCATAAATGTTGTT
3010
3011
GTTTCAATACTTCCTTAGAGGTATGGAAAC
TAAGACATTCTTTCGCTAAGAAAATCTAATAGTTT
3075
3076
GTTTCAATACTTCCTTAGATGTACGAAAAA
3105
Left flanking sequence : Till position 412 (length
bp)
TGTGTGTTAGAATGGTTTATGGAAAGGAAGGATATGGAAGGTCAAAAAACATCTTGCTTTCAGAGTGTGT
TTGTGGTATAATTTCTCTTGAACTCAACGG
Right flanking sequence : From position 3105 (length
bp)
AAATAACCCCCACATGAGTGGGGGGATGTTTTTGTTATAGACTCTCAGATCAAAAGATCACGTAAGTTCC
CTTCTTTTTCACAAACTCTACAAATCTTCT
Print the CRISPR sequence : From position
bp To position
bp