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CRISPRs details
NZ_CP011104_1
Flanking alignement tool
Page manual
  
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NZ_CP011104_1                                                                                                                 
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Strain :
Photorhabdus temperata subsp. thracensis GCF_001010285
RefSeq :
NZ_CP011104 (chromosome circular)
CRISPR id :
NZ_CP011104_1
DR consensus (28 bp) :
TTTCTAAGCTGCCTGTACGGCAGTGAAC
Number of repetitions :
25
Begin Position :
4707654
End Position :
4709122
4707654
TTTCTAAACTGCCTGTACGGCAGTGAAC
GATACCATACGCAGCCGCAAACACCTTCTTTT
4707713
4707714
TTTCTAAGCTGCCTGTACGGCAGTGAAC
TTTCTATTTCATGTTTATCGAACATACCCATC
4707773
4707774
TTTCTAAGCTGCCTGTACGGCAGTGAAC
TCCCGTATAAGATACAACATCAAATCACCGAA
4707833
4707834
TTTCTAAGCTGCCTGTACGGCAGTGAAC
TAACAGAAGTAGCAAAATTAACATATGAAAAT
4707893
4707894
TTTCTAAGCTGCCTGTACGGCAGTGAAC
GAATATTCCGGTCTCAGTTCCCGCTATAAATT
4707953
4707954
TTTCTAAGCTGCCTGTACGGCAGTGAAC
ATTAAAATTAACGTCGTGAATATTATTAAGCA
4708013
4708014
TTTCTAAGCTGCCTGTACGGCAGTGAAC
GTATTTCACCAAAGAACCTTATGCCGTGCACA
4708073
4708074
TTTCTAAGCTGCCTGTACGGCAGTGAAC
GAACGCATGGGGATCATTAGCCCAACCGAACG
4708133
4708134
TTTCTAAGCTGCCTGTACGGCAGTGAAC
TTTAGCGCTGCCCCTGCCTCCGTGTGCACCTC
4708193
4708194
TTTCTAAGCTGCCTGTACGGCAGTGAAC
ATTAAAGCCGCGAAAGATAGCATCGGCGCAAA
4708253
4708254
TTTCTAAGCTGCCTGTACGGCAGTGAAC
GAAATGCTGGTTGGGAAATGCAGCGTCTACGC
4708313
4708314
TTTCTAAGCTGCCTGTACGGCAGTGAAC
CTATATCCACGATTAGCATACGCATACCCATCA
4708374
4708375
TTTCTAAGCTGCCTGTACGGCAGTGAAC
ACGAACAGAAAAAGGCTAACGAAAATTCGAAA
4708434
4708435
TTTCTAAGCTGCCTGTACGGCAGTGAAC
CACTACCGAAGAGCTTCATCAGCAAGCAGAAA
4708494
4708495
TTTCTAAGCTGCCTGTACGGCAGTGAAC
TGATTATCTCTGTCACTATTTCTATTTCATAT
4708554
4708555
TTTCTAAGCTGCCTGTACGGCAGTGAAC
AGTTTCAGAACGCTTTGTACCTAATGCGATTT
4708614
4708615
TTTCTAAGCTGCCTGTACGGCAGTGAAC
CGTAAGAATAACCGGATGATTCGCAAGTGCTA
4708674
4708675
TTTCTAAGCTGCCTGTACGGCAGTGAAC
CGTGTGCTTGAGCTTTAACAGTCCGCCTAATC
4708734
4708735
TTTCTAAGCTGCCTGTACGGCAGTGAAC
TCTATTGAGAGCAGCAGAAAGAGACTGGAAAT
4708794
4708795
TTTCTAAGCTGCCTGTACGGCAGTGAAC
ACTTTGATGCACGTTATGACAACGTTCCCGCC
4708854
4708855
TTTCTAAGCTGCCTGTACGGCAGTGAAC
TGTGTGGAACGTGGCAAGGAGACGCATTTCAA
4708914
4708915
TTTCTAAGCTGCCTGTACGGCAGTGAAC
TTTTTTTAATAACCAAAGTGCTCCCCGCGAAC
4708974
4708975
TTTCTAAGCTGCCTGTACGGCAGTGAAC
GTAAGCCCCCTTTGGAATGGTTCAATTCTGTG
4709034
4709035
TTTCTAAGCTGCCTGTACGGCAGTGAAC
GCAACGGAAAGACAGTGAATGGAAATACAAAA
4709094
4709095
TTTCTAAGCTGCCTGTACGGCAGTGAAC
4709122
Left flanking sequence : Till position 4707654 (length
bp)
AATAAATTCATCGTATTTATCTCAAAATCATGCTCAAAAAAACGCACCAACCGAAGTCAGTGCGTCAAAT
AAATCAACTCATTAAATCTGAATTTAATCA
Right flanking sequence : From position 4709122 (length
bp)
TGTTAGATACTAACCTTAACCTGCTGACTTTTAAAGAGTAGAGTGATAAAAAGTAAAAAAACCCTTTTTT
ACGAGGTAAATAACATTTCTTTAAAAAACA
Print the CRISPR sequence : From position
bp To position
bp