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CRISPRs details
NZ_CP011104_2
Flanking alignement tool
Page manual
  
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NZ_CP011104_2                                                                                                                 
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Strain :
Photorhabdus temperata subsp. thracensis GCF_001010285
RefSeq :
NZ_CP011104 (chromosome circular)
CRISPR id :
NZ_CP011104_2
DR consensus (28 bp) :
TTTCTAAGCTGCCTGTGCGGCAGTGAAC
Number of repetitions :
15
Begin Position :
5031840
End Position :
5032708
5031840
GCGCGCTGCTGCCTGTACGGCAGTGAAC
TGTTATCTTGCATATGCTTTAGAACTGCAAGC
5031899
5031900
TTTCTAAGCTGCCTGTGCGGCAGTGAAC
AACTGGCTGCACTCGTCAAAGCGAAGCGAACAG
5031960
5031961
TTTCTAAGCTGCCTGTGCGGCAGTGAAC
CAGAGATGAATAATGTAGTAGCAAACCCATTT
5032020
5032021
TTTCTAAGCTGCCTGTGCGGCAGTGAAC
GCCGCCGCTGTGACCCGCCGTTGTTACGTCG
5032079
5032080
TTTCTAAGCTGCCTGTGCGGCAGTGAAC
GTTTAGAAGCCAGGAACAAAGGGGTCAAATTT
5032139
5032140
TTTCTAAGCTGCCTGTGCGGCAGTGAAC
GTCAAATTACTGGCGGTCGTGCTGGTTATCCG
5032199
5032200
TTTCTAAGCTGCCTGTGCGGCAGTGAAC
ATAATATCTGTCACGCAAACCTTGCCATTTTG
5032259
5032260
TTTCTAAGCTGCCTGTGCGGCAGTGAAC
AGATGGATTCATGTTCCTTCGGGGGCTTTGTT
5032319
5032320
TTTCTAAGCTGCCTGTGCGGCAGTGAAC
TTACGTCTCCGTTGCAGTAACGGCATCTCACA
5032379
5032380
TTTCTAAGCTGCCTGTGCGGCAGTGAAC
ACAACTCAGTGATAGAGTTGAATTGATTGCTA
5032439
5032440
TTTCTAAGCTGCCTGTGCGGCAGTGAAC
TATAGGGTTAGGGGAATCAGGAATCAGGTTAA
5032499
5032500
TTTCTAAGCTGCCTGTGCGGCAGTGAAC
TGGACACCAAGATATTTCTAAGCTGCCTATGC
5032559
5032560
TTTCTAAGCTGCCTGTGCGGCAGTGAAC
TGGTTCCAATTGCCGGACTGCTCGTGATTTCCG
5032620
5032621
TTTCTAAGCTGCCTGTGCGGCAGTGAAC
GGGTAAAGACGGATTAGCGACTCAGGCAGGTT
5032680
5032681
TTTCTAAGCTGCCTGTGCGGCAGTGAAC
5032708
Left flanking sequence : Till position 5031840 (length
bp)
GAGAAAGACCATCAATGGGTTAACAGTGAAGAATATGCTTACAAGCATAAGAAATAACCTATATCAAGCA
AAATTAACTTTTTCTAGCGCGCTCAACTGG
Right flanking sequence : From position 5032708 (length
bp)
TGTTAAATACTAGCTTTAACCTACTGATTATTAAAGAGCATAGTTAAAAAAAGCGGAAAAAACCCTTTTT
AGAAGCAGCGGCTAATCTCTTAAATAAATC
Print the CRISPR sequence : From position
bp To position
bp