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CRISPRs details
NZ_CP011259_2
Flanking alignement tool
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NZ_CP011259_2                                                                                                                 
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Strain :
Salmonella enterica subsp. enterica serovar Agona str. 460004 2-1 GCF_000484195
RefSeq :
NZ_CP011259 (chromosome circular)
CRISPR id :
NZ_CP011259_2
DR consensus (29 bp) :
CGGTTTATCCCCGCTGGCGCGGGGAACAC
Number of repetitions :
9
Begin Position :
38932
End Position :
39448
38932
ACGGCTATCCTTGTTGGCGCGGGGAACAC
CTGCTCAGCGATAACCGGCAGGTTTAGCCGCT
38992
38993
CGGTTTATCCCCGCTGACGCGGGGAACAC
TTGCCGACCAGATCAATGACAACGCTAACCTT
39053
39054
CGGTTTATCCCCGCTGGCGCGGGGAACAC
CAGATCACAACGGGTGACGTGATTTTTGGAAA
39114
39115
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TCGTTTTTATCTGCATCTCACTCCCCCTTAAC
39175
39176
CGGTTTATCCCCGCTGGCGCGGGGAACAC
GCCTAAGCCGGGATTTGCTTTAGGCCAGTTGG
39236
39237
CGGTTTATCCCCGCTGGCGCGGGGAACAC
AATAAATGGGATGATCCTGTTGTCCGGGATGC
39297
39298
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TCCATCGCTTTTGCCAATCTATCAGACAATTT
39358
39359
CGGTTTATCCCCGCTGGCGCGGGGAACAC
GGCGACTAACGGCGTGCTGACCAGCCAGTCGC
39419
39420
CGGTTTATCCCCGCTGGCGCGGGGAACAC
39448
Left flanking sequence : Till position 38932 (length
bp)
CATGGCCTTCTCCTGTATAAAAGCCTCCCCGGAAAAACGCGGCCTTTTTACTTTACAGGTTTGTAGCAGC
CATTACTGGTACACAGATTATGATTATGCA
Right flanking sequence : From position 39448 (length
bp)
ACTAAACGTATATCATTGTTTATAAACTACTTTTTATCAGCACCACATTCCACCAACATAATCGCAACAA
TTTAAATTATTAAAGAACAGCTAATTTGCT
Print the CRISPR sequence : From position
bp To position
bp