Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP011995_7                                                                                                                 top


Strain : Porphyromonas gingivalis GCF_001263815 RefSeq :NZ_CP011995 (chromosome circular)
CRISPR id : NZ_CP011995_7
DR consensus (30 bp) : GTTTTAATTCCTGTATGGTGCAATTGAAATNumber of repetitions :17
Begin Position : 2125281 End Position : 2126366

2125281ATTTTAATTCCTGTATGGTGCAATTGAAATCTTCGATTGGCCCGTAAGGGAATTCGCAGCCAAAGC2125346
2125347GTTTTAATTCCTGTATGGTGCAATTGAAATGATCCGATTCGTCTGCGTCGTCGAGCATAAAGGCG2125411
2125412GTTTTAATTCCTGTATGGTGCAATTGAAATAAAAACGACAGCGTGAAGTCGCCGGAGAGGCTGAT2125476
2125477GTTTTAATTCCTGTATGGTGCAATTGAAATAATAAAGCAGATTGGGAAAATCCTATATGTACTTT2125541
2125542GTTTTAATTCCTGTATGGTGCAATTGAAATTAGGTTAGTAAAATAGAGGTGTTCGCCGTAATATACT2125608
2125609GTTTTAATTCCTGTATGGTGCAATTGAAATCTGCAAACTCGTACCTATCCACTGCAGGCTTGGCTTC2125675
2125676GTTTTAATTCCTGTATGGTGCAATTGAAATAGCTATAACCCTCGATGAGTACTACGAGGGAAATGGC2125742
2125743GTTTTAATTCCTGTATGGTGCAATTGAAATTTTTCAGTCGGTAGCGAAAACTACTTTTTATTTC2125806
2125807GTTTTAATTCCTGTATGGTGCAATTGAAATAACGCATTTTATGTGCGCCAAGATAATTGGGGCAT2125871
2125872GTTTTAATTCCTGTATGGTGCAATTGAAATCAAGATAAGCGCACAAGCGGCGGCCACACCACGGCA2125937
2125938GTTTTAATTCCTGTATGGTGCAATTGAAATATAGACCTAAAAGAATCCGTTGCGGCACCCTTCGTTG2126004
2126005GTTTTAATTCCTGTATGGTGCAATTGAAATTCTTCTTCTCGAATCCCAAGTCGGTCAGACTTGTGTC2126071
2126072GTTTTAATTCCTGTATGGTGCAATTGAAATTCAAGAGACGAGTACTATAGTAGGCTAATTAACCCA2126137
2126138GTTTTAATTCCTGTATGGTGCAATTGAAATACGGTATCGACTACGTTGTCGGAGAGAGCAAGATACC2126204
2126205GTTTTAATTCCTGTATGGTGCAATTGAAATTTTTTTGTGTCCATTAAAGCAGTCCTTTTGCCCTCAA2126271
2126272GTTTTAATTCCTGTATGGTGCAATTGAAATAATGAGTAGAGAAAATACTCAAAATATACAACAAA2126336
2126337GTTTTAATTCCTGTATGGTGCAATTGAAAT2126366
Left flanking sequence : Till position 2125281 (length bp)
AAATATACGCCAATCGCCGTGCAAAGGTCTCTATACCTAAAAAACAAGCCAAATAACCCCGAAACTAGTT
GTCAGTTTTTGGGAGTAGTATAATGGATAC
Right flanking sequence : From position 2126366 (length bp)
CCGTTACAAATATAGGCTTTTCTGTTTGAATGTGAGGAGTTTACGAAAAGGTGAAACCCAAAATTCAGAC
ATTCATAGTTGTCGATGTCTGATTCTATGA
Print the CRISPR sequence : From position bp To position bp