Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP012174_2                                                                                                                 top


Strain : Metallosphaera sedula ARS120-1 GCF_001266695 RefSeq :NZ_CP012174 (chromosome circular)
CRISPR id : NZ_CP012174_2
DR consensus (24 bp) : CTTTCAACTCTATAGGAGATTAACNumber of repetitions :151
Begin Position : 1082256 End Position : 1091910

1082256CTTTCAATTCTATAAGAGATTAACATTCTATACCACTGCATGGTCTCGGCAGTTGAAGGTGA1082317
1082318CTTTCAACTCCATAGGAGATTAACTGATTTTGACACGGCCTATCAAAATGTAATAAAAACGCATA1082382
1082383CTTTCAACTCCATAGGAGATTAAGTAATAGGTATAATATTGGGCATTCTCGCCCTAGTTCAATT1082446
1082447CTTTCAACTCCATAGGAGATTAACAGACCCAAAACCTAAAACTCCAAAAAGTCTTTGAGCAATT1082510
1082511CTTTCAACTCCATAGGAGATTAACTTACTTCTAATGATTACAGGGATTTCTCAGAACCCTTCT1082573
1082574CTCTCAACTCCATAGGAGATTAACGCTGAAATTGGCAGAGGTAAGGAAGCTAATCGAGTCGAA1082636
1082637CTTTCAACTCCATAGGAGATTAACGTGAGGATTCACCGAATCCTGCCTTAGACGATACCGAGCAGAAG1082704
1082705CTTTCAACTCCATAGGAGATTAACAGAAGAAAAAGTATACTTGAAAAGAAGATTGAATTTTTAGA1082769
1082770CTTTCAACTCCATAGGAGATTAACATCAAATGATGCCAAAAAGTGATCTACCTATTCTTTTCAT1082833
1082834CTTTCAACTCCATAGGAGATTAACAACATGATAAGGCTTTACTTAGAAAGTTAGAGAAAAAATT1082897
1082898CTTTCAACTCCATAGGAGATTAACCGTGATTCATTAAGGTTATCATAATGAATTGGAAAACAGTCT1082963
1082964CTTTCAACTCCATAGGAGATTAACTTCAAAAAATGGTCAAGGTGATAGAGAGTCAGTTATTAG1083026
1083027CTTTCAACTCCATAGGAGATTAACAGTTCTACGGAAAACTATCAATCCAGATAGCAATAAAGA1083089
1083090CTTTCAACTCCATAGGAGATTAACATGCGATTACCACCACGGCTCCGTTTTGCCCGTTTGCTCC1083153
1083154CTTTCAACTCCATAGGAGATTAGCCATCGGTGTATTACTACTCACTGTGATTGGTGTATCAAG1083216
1083217CTTTCAACTCCATAGGAGATTAACTCCAGGTACATCGTCAGCGAATGGATCAGGAGGAGCAGG1083279
1083280CTTTCAACTCTATAGGAGATTAACTCCACTCGGTGCCGTGAAAGTTTTGACAAGACTCATGTTTGA1083345
1083346CTTTCAACTCTATAGGAGATTAACTCAATAATTGACGAGCAAGATTTAGTGATTCCAGACGAGG1083409
1083410CTTTCAACTCTATAGGAGATTAACACAGTTCACAAACGGAATTGTTTGATAACTTCTTGGAAT1083472
1083473CTTTCAACTCTATAGGAGATTAACCTTACTTTCCATGTTCCTCCATTCACAAAGTAAAGTACT1083535
1083536CTTTCAACTCTATAGGAGATTAACCGGTCACTGAAGCCGATCCACCCTTAGTTGAGACCACGAG1083599
1083600CTTTCAACTCCATAGGAGATTAACTAATTGAAGTTACAGTAGAAATACAAAACCAAAAAATGA1083662
1083663CTTTCAACTCCATAGGAGATTAACATCAAATTACTGGAGAAGAGTGGAACAAAATAATAAGGGAA1083727
1083728CTTTCAACTCTATAGGAGATTAACTTATACGGTTATTGGATGACGCGAGTATATCGTGAAAGTTA1083792
1083793CTTTCAACTCTATAGGAGATTAACAAAGCCTTCGTATCTGATGACGGCTCAGTTCCAATCGTTA1083856
1083857CTTTCAACTCTATAGGAGATTAACATGAAGATGTGGAGTCAAAGACCGAAAGGCCCTGGGATTA1083920
1083921CTTTCAACTCTATAGGAGATTAACATATTTTCGTCTTATGTAGTTTGTAATTGATCTTTTTTTCTTT1083987
1083988CTTTCAACTCTATAGGAGATTAACTTAGGACCGTTGGGTTCACGAGTTACAACGAGATGGTGAAA1084052
1084053CTTTCAACTCTATAGGAGATTAACTTCATGCAGACTACGAAGTCGCTCTAATTTATCTTAATCT1084116
1084117CTTTCAACTCTATAGGAGATTAACGTCATAAACCACTGATCACTAGTAGTATGTTCGAAACTAT1084180
1084181CTTTCAACTCTATAGGAGATTAACTGTTGTGTGAATCTGAACCCGAAGACGAGGACATGTACC1084243
1084244CTTTCAACTCTATAGGAGATTAACCAAGTGTTGTTTGTGGGGATAACGAACTTGGGGAAGGAA1084306
1084307CTTTCAACTCTATAGGAGATTAACTATATGACAAGTTGAGAAGGAATATTCTTCAACGCGGGAA1084370
1084371CTTTCAATTCTATAGGAGATTAACAAGTTAGTGGGGGAAGCCCGTGTAGAGTTCAGATTAGGTAC1084435
1084436CTTTCAACTCTATAGGAGATTAACATCATCCCCCTCATCAAAACACTCATCAAGATACTCATCACTGTA1084504
1084505CTTTCAACTCTATAGGAGATTAACTCTCGACGCGGAGAGGATAGAGCGGTTGGTCGAGGACGA1084567
1084568CTTTCAACTCTATAGGAGATTAACCGAATTTTTCCCCCGTGAGCGGGGGGTTAGAAAGAGTTTGAC1084633
1084634CTTTCAACTCTATAGGAGATTAACCCCATAGTGGTCCCCTATGAGTTTGAGGATACAACTTCATTAA1084700
1084701CTTTCAACTCTATAGGAGATTAACCGGGGTCCAAAGGTTCCCTGAATGTAAATATATTATTAC1084763
1084764CTTTCAACTCTATAGGAGATTAACCATATGACGCTCTCAAGGTAGTCACTCAAGATATCTTAGC1084827
1084828CTTTCAACTCTATAGGAGATTAACTTACGATCAGCCTTTTCGTTGCAGGTCTAATTCTCAGA1084889
1084890CTTTCAACTCTATAGGAGATTAACCCAACTGTCCAGCCTGCCCTGCTGGACTAGGGTTTTCGAAC1084954
1084955CTTTCAACTCTATAGGAGATTAACCTCGTTAAGATATGCATTGATCACTTACGCTTCCAAAAA1085017
1085018CTTTCAACTCTATAGGAGATTAACTCTTTTTTTGCGGTTATACAATTAAACGTTTCGTGAAT1085079
1085080CTTTCAACTCTATAGGAGATTAACACGTCCTTCTCCGTGATGTAGAGCGTACTGCCTGAAGTCCCTGT1085147
1085148CTTTCAACTCTATAGGAGATTAACAAAGGACCATAATACATCACAACCTAGTCTGCTTGCAAACTGA1085214
1085215CTTTCAACTCTATAGGAGATTAACATAACCGGAACGAAACTAGAGGAATACTGTGAACCGGTAA1085278
1085279CTTTCAACTCTATAGGAGATTAACCAATGAGTGTTGGTCTCATCCTTGAGGGTCCTGATGGAGT1085342
1085343CTTTCAACTCTATAGGAGATTAACCAATACGACTACGGGTTCGAATCTTGAAAAGTTCGGTG1085404
1085405CTTTCAACTCTATAGGAGATTAACATGGTCAATTATGTCCTTAATATGATGGTAGAGATATTGA1085468
1085469CTTTCAACTCTATAGGAGATTAACTGGACATGTCTACATCAAAGAAGTCCAAGTACTTTGCCT1085531
1085532CTTTCAACTCTATAGGAGATTAACTACCTGAAGTTCTCCCACTCTAGCAGGGAGCTGCTGTCCTACT1085598
1085599CTTTCAACTCTATAGGAGATTAACGGCGTAAAAAATGCAATAGGAGGAGTAGGAAGCTTCTTTTC1085663
1085664CTTTCAACTCTATAGGAGATTAACTTACTATTTCTTAAGGAACGACGTAAGAGAAAGTAGTAAT1085727
1085728CTTTCAACTCTATAGGAGATTAACGGAATAAAGGACAAGGGATTCTTCATCAGTTTGGGA1085787
1085788CTTTCAACTCTATAGGAGATTAACACAAGGAGTAGCTCTTACTGGTAATGAGGGTATAATAAGAAA1085853
1085854CTTTCAACTCTATAGGAGATTAACCGCTCTGGACCTCCTTCTTGACGTAGTCATTTCTCTTTAGTT1085919
1085920CTTTCAACTCTATAGGAGATTAACAGACAAGTCCAGAGGGTTAGGGAGGAGAGGAGGTCCAGTCTT1085985
1085986CTTTCAACTCTATAGGAGATTAACACTTTAGCTTTCATGACTTACACAACTTCATATCCACCT1086048
1086049CTTTCAACTCTATAGGAGATTAACTGAATAAACCAACTCTCCTTCATAGTTTAAATTAATTACAT1086113
1086114CTTTCAACTCTATAGGAGATTAACAAGAGAATAAGGGTAGTATATAACCCTGCAATCACCTTAA1086177
1086178CTTTCAACTCTATAGGAGATTAACCAGCTTGTGGTATTCCTCCTAATATTACTGCATTGACCC1086240
1086241CTTTCAACTCTATAGGAGATTAACTTTAAGATAATTGGAAAAGAACAATTAACTAAGAACATTA1086304
1086305CTTTCAACTCTATAGGAGATTAACATGGGGGTTCAAAGGGGGTGAAATACCCCTTCCGTCAAGGA1086369
1086370CTTTCAACTCTATAGGAGATTAACTGCATACAGTCTTTTGCAACACTTATTATTCTGTCATATT1086433
1086434CTTTCAACTCTATAGGAGATTAACCTTCGCTATATCTACCATGAATAAGTCTTGAATGTAAA1086495
1086496CTTTCAACTCTATAGGAGATTAACTTATATTTAGTTAGAATTTTTCTCAAAAAATCATCTCGATCT1086561
1086562CTTTCAACTCTATAGGAGATTAACCTAACCGTATTGAGTCCGTGGGTCGCACCGGCCCACAGTA1086625
1086626CTTTCAACTCTATAGGAGATTAACAGTCTGCTGGCTTTAATCTTCATGTAGTTGCCAGTAGGTTC1086690
1086691CTTTCAACTCTATAGGAGATTAACTTTTGCTTTTCCTTTCTCAAATTTTCTTCTCCATGATTCA1086754
1086755CTTTCAACTCTATAGGAGATTAACCGGTCTGAGTCTCTGGCTGAGACTCTAACTTCTTCTTGAGA1086819
1086820CTTTCAACTCTATAGGAGATTAACATACCCTAGAGGAAGAAGTTGAGGAGGTCCTGGCTCAACTTG1086885
1086886CTTTCAACTCTATAGGAGATTAACATGAAAACGACCGTGACGTCATTGCAATCATGAATCTCAA1086949
1086950CTTTCAACTCTATAGGAGATTAACACATGCTAGATTTTGATAAAAATTGAATGCAGAATTTAACCA1087015
1087016CTTTCAACTCTATAGGAGATTAACAACTGTTGCAGAATCGTACTGGAAAGCGGTCCCTGCATT1087078
1087079CTTTCAACTCTATAGGAGATTAACAGCTTTACGGCAAAGAGAAAGAGTTTGATGAGTTCA1087138
1087139CTTTCAACTCTATAGGAGATTAACACGGACACGACCCAGGGGTGATGGTCGTCCCGCTCATGT1087201
1087202CTTTCAACTCTATAGGAGATTAACTCAGAAGAGCCATCGAGAAGATGGTTAAGGAAGAGA1087261
1087262CTTTCAACTCTATAGGAGATTAACTCGATCTAATGAAATTGGCTAGGGAGTTCGGTCAGGGGTT1087325
1087326CTTTCAACTCTATAGGAGATTAACGTAAAATAGATGAAATCCATGTCCGCTCCACATTACTAGAA1087390
1087391CTTTCAACTCTATAGGAGATTAACCCTCTCAACCTCATGAAAAAGGTGGATGGGAGGGTAG1087451
1087452CTTTCAACTCTATAGGAGATTAACCTTCCCTGATGGTTACACCCCTTTGCACCTAGCGGTAGAACT1087517
1087518CTTTCAACTCTATAGGAGATTAACACGGACCAATCTTTTGCCTTGCCTCCTTGTACTGCTCATCTAG1087584
1087585CTTTCAACTCTATAGGAGATTAACCCTCAGTGGGACGTTGGCTTTTGATTGGAGAGGTATTC1087646
1087647CTTTCAACTCTATAGGAGATTAACATTTAACATCTTAGGTGTTATCTTAAGATATTCTGGCTT1087709
1087710CTTTCAACTCTATAGGAGATTAACTTCTAAGACGTGCTCCCTATGTGGGGAAATTCATGAGAG1087772
1087773CTTTCAACTCTATAGGAGATTAACCACCTGAAAGGTTACGGCATTCAGGTAGGACGCAATCCTA1087836
1087837CTTTCAACTCTATAGGAGATTAACTTATCATGGCGAATATCAGACGTATTAGGTCACTCATCT1087899
1087900CTTTCAACTCTATAGGAGATTAACCGCTCCATAATGATATAGTCATGATACAAGGATGGCGTTA1087963
1087964CTTTCAACTCTATAGGAGATTAACAAGCAGGAACTGCTTTACAAAATCAAATGGCTAATACATA1088027
1088028CTTTCAACTCTATAGGAGATTAACTTTTTCTCTTCTCTTTCTCATACGATAAAATACGTAAAGT1088091
1088092CTTTCAACTCTATAGGAGATTAACTTGCTTCTGGAAAGCGGCGCAAGAGAAATTGAGGTTTTAA1088155
1088156CTTTCAACTCTATAGGAGATTAACTACAGATAAGGAAATTCAAAACCTACAGCCAACAGAGAAAT1088220
1088221CTTTCAACTCTATAGGAGATTAACTTGTCTTTTGATTTTCTACTCAACAATTTTGAGTAGAAAA1088284
1088285CTTTCAACTCTATAGGAGATTAACCGTACGAGGCTATCACATGCCTGGGCAAAGGCGTGTGTTC1088348
1088349CTTTCAACTCTATAGGAGATTAACCTTGACGTGGAAGACAAGGCATTATTCACGAAATGGAT1088410
1088411CTTTCAACTCTATAGGAGATTAACGGAACAAAGTGCTACAGCCTTATTGCTAAGGCAAAACGAAGC1088476
1088477CTTTCAACTCTATAGGAGATTAACCATCGGGCGCCGGGAATGGTTCTAAGCCGTAACGCTTAAA1088540
1088541CTTTCAACTCTATAGGAGATTAACATTCCCAGGGCATTATCTACAGAAAATGGCAGAAATATAA1088604
1088605CTTTCAACTCTATAGGAGATTAACCAAATCGCCCCCGTTTCGCCCGCCCGTTCTCTTTCCTTTTCACC1088672
1088673CTTTCAACTCTATAGGAGATTAACATTGATATTAACGTTAAACCCCACGCCCCCAGTGAACTT1088735
1088736CTTTCAACTCTATAGGAGATTAACAACGCAGAAAGATGCGTGAGAGAAGCAATGGCGTATCTAGT1088800
1088801CTTTCAACTCTATAGGAGATTAACCCCCCGCTTAGTTTCTGCCACGCATACCTCTGTTCTGCC1088863
1088864CTTTCAACTCTATAGGAGATTAACTCTGGAACCTTAGTACTTCCATGTTAACCACCTGTGTAT1088926
1088927CTTTCAACTCTATAGGAGATTAACTTCACTCTCCCAGTAGACGTTCAGACGTTCAAGATCGTT1088989
1088990CTTTCAACTCTATAGGAGATTAACATATGGGATGTTCCTATTTAATAAACAAGGAAAAAAGAAGG1089054
1089055CTTTCAACTCTATAGGAGATTAACTCTCACTTATGACTAAAGGTTCTTTGTTCTCAACTTCTTT1089118
1089119CTTTCAACTCTATAGGAGATTAACAGCCACAACCGACGACGGAAACTTACTATTTTGTGTA1089179
1089180CTTTCAACTCTATAGGAGATTAACGCACCCCACCAAGTCATGGTAGTGGTAGCACTAACAGTAG1089243
1089244CTTTCAACTCTATAGGAGATTAACAAGCTAGTTACATGAATCGTCACATTAAATGTGTTACTTGA1089308
1089309CTTTCAACTCTATAGGAGATTAACCAGTCCGTAATTACCCTATTGCTAACTAATTTCATAGGAATAG1089375
1089376CTTTCAACTCTATAGGAGATTAACAGTTAGGTTTTCTACTATCATTATCATTATTGAATCAGCG1089439
1089440CTTTCAACTCTATAGGAGATTAACTAGTATGGTGCGCCCAGCCTCCGTGCTGACGACATCATA1089502
1089503CTTTCAACTCTATAGGAGATTAACACTGTCTCTATCGGTATCCAAAAATGTAAAAAATTCTCATT1089567
1089568CTTTCAACTCTATAGGAGATTAACACCAATTGACGGCCACGGATGGAACTCCGACAGTGA1089627
1089628CTTTCAACTCTATAGGAGATTAACATTGCCAGCATACGCTAGATCAAAGCTAAAAGATGAGTA1089690
1089691CTTTCAACTCTATAGGAGATTAACTGAATCCTAAAGCGTCAAGAATTACCTTCCATTCGTCAT1089753
1089754CTTTCAACTCTATAGGAGATTAACATCAAGCGATTGCATTTGTTCTCAAGCAGAGGTTACAGGA1089817
1089818CTTTCAACTCTATAGGAGATTAACATGAGAAGTAAAGAAGAATTGAATGAAGCGTTGGAGCAAA1089881
1089882CTTTCAACTCTATAGGAGATTAACATGGGAATACGTTTACCAATTACTGATGCTGATGGGAAGGCCAAC1089950
1089951CTTTCAACTCTATAGGAGATTAACAGATTGGGAAAGGTGGTTCAAAGGTACAGACAATAACAT1090013
1090014CTTTCAACTCTATAGGAGATTAACATCATAACTGACGTTGACACCTGCCATAGTTGTTCTGATGG1090078
1090079CTTTCAACTCTATAGGAGATTAACGCAAATGCCTTCAAAAACTACTTCAAGCGCTAATGTTAGGG1090143
1090144CTTTCAACTCTATAGGAGATTAACGAGAGAGAAAGATTTATATACTTGACATGACATATGTATAAA1090209
1090210CTTTCAACTCTATAGGAGATTAACCTATTAACATCATAAACAATTTCGCCACACTAACAGGA1090271
1090272CTTTCAACTCTATAGGAGATTAACACGCAATGGATTATCTGGAAGAGATGCTGGGCAATAAG1090333
1090334CTTTCAACTCTATAGGAGATTAACCACGATAAATTATTGGATGAAAACATCTTTTAACTTGTCGC1090398
1090399CTTTCAACTCTATAGGAGATTAACTGAAAATATTTCAGCGTTATACTTTTGCTTAATGTACTCTTT1090464
1090465CTTTCAACTCTATAGGAGATTAACAGGCGGAAGCTAAGTATTTGTTAGAAATAGAGAAATATACA1090529
1090530CTTTCAACTCTATAGGAGATTAACTGTTGATCGGAGACATTATTTAGGTCTTTAATCCCAAATC1090593
1090594CTTTCAACTCTATAGGAGATTAACCGATTTACTGGGACTGTGATACCCAACAGCATAGACATCAGTT1090660
1090661CTTTCAACTCTATAGGAGATTAACTAGGATTTTTTTTCCTAGATGATAGATTAATTGGAAATTCCT1090726
1090727CTTTCAACTCTATAGGAGATTAACGAAGTGTTCGCGCCTCTGCTAGAACAATACGGAATGAAAGTGCC1090794
1090795CTTTCAACTCTATAGGAGATTAACACACGTGGTGATTGATCCATTCCAACTAAGGCAAATCATTC1090859
1090860CTTTCAACTCTATAGGAGATTAACAAGTTATTCGGCGCTTTGCGCCTTCTTTTTTTGCTTAAACA1090924
1090925CTTTCAACTCTATAGGAGATTAACAAATAATTAGTTAGTAGGAGGATAGTTTTGAAAACTTTTTAGAAG1090993
1090994CTTTCAACTCTATAGGAGATTAACGTTTGTTTTAGCGCAATATTTAGATCAACAGAAGAAGAAGA1091058
1091059CTTTCAACTCTATAGGAGATTAACACCCAAAAACGTAGTGGGGAAAATATAATCTTCATTATTT1091122
1091123CTTTCAACTCTATAGGAGATTAACTAGCCCCAGTCGGTTTAGGCGGAAAATTCAACATTAAATT1091186
1091187CTTTCAACTCTATAGGAGATTAACTGACGGTTTGACAGAGGTCTATGTGTTCACATACAGTAA1091249
1091250CTTTCAACTCTATAGGAGATTAACTGAGAAGAGAGAACTATATTTTAGTGAAAAAAATGTCAGC1091313
1091314CTTTCAACTCTATAGGAGATTAACACTATCCATCTTCCACAATTTATATTATCCATATTTTCATTA1091379
1091380CTTTCAACTCTATAGGAGATTAACAGAATTTATAAGCCAAATTCTTGATAGTTTCTAACAAACG1091443
1091444CTTTCAACTCTATAGGAGATTAACAATATTTGTAAATTTCATCAAACATTTTCCTAACTTTATC1091507
1091508CTTTCAACTCTATAGGAGATTAACAAAGAAGAGAATACAAGCTGTATTTTGTGAGGTTTAGCA1091570
1091571CTTTCAACTCTATAGGAGATTAACATTTGGCAAAATCCTAGCCAGAAGATAGGGGGCGACAAC1091633
1091634CTTTCAACTCTATAGGAGATTAACCAGTGAAAAAGAAATTACTTAATGTAGTCGAAAAGTG1091694
1091695CTTTCAACTCTATAGGAGATTAACATATGATGGAGAAACTCAAGTATATATTTTCACTTCAGATAA1091760
1091761CTTTCAACTCTATAGGAGATTAACAATCCAGAACACTACGCTTTACCAATACATGAAAAGTAT1091823
1091824CTTTCAACTCTATAGGAGATTAACTATAGAAAGCTGTTGGACGAAGCGGTCTCTCCTGAAGAG1091886
1091887CTTTCAACTCTATAGGAGATTAAC1091910
Left flanking sequence : Till position 1082256 (length bp)
GAACTTTTCGTCGAACCCGATGGGAGTTATGAGGCATGTCACAGGGAATAATTGGGAGGGAGTAAAAAAG
GTAAACTTTCCGATATCAGAACGTGTGATT
Right flanking sequence : From position 1091910 (length bp)
TGATACCTTTTATATTACTTCTATTCATTATCTATCTTCTTCCTTTATATAATCTTTTCTGTCTCATTGT
CTTACAATTTTTATCAGATCTCGTCAGATC
Print the CRISPR sequence : From position bp To position bp