Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP012344_1                                                                                                                 top


Strain : Salmonella enterica subsp. enterica serovar Choleraesuis str. ATCC 10708 GCF_000487295 RefSeq :NZ_CP012344 (chromosome circular)
CRISPR id : NZ_CP012344_1
DR consensus (29 bp) : GTGTTCCCCGCGCCAGCGGGGATAAACCGNumber of repetitions :19
Begin Position : 955650 End Position : 956776

955650GTGTTCCCCGTGCCAGCGGGGATAAACCGGAACGAGTAATCTTTGTTTTCCCCGTACCTTC955710
955711GTGTTCCCCGTGCCAGCGGGGATAAACCGCGAGGATAGTTGTACCAGGTCAGGCCGCGCTG955771
955772GTGTTCCCCGTGCCAGCGGGGATAAACCGCAAAATCAAAATTTCGAAATAAATGATTGGAA955832
955833GTGTTCCCCGTGCCAGCGGGGATAAACCGTCAAACGGTTCTGGAACATCTAAAAATACATG955893
955894GTGTTCCCCGTGCCAGCGGGGATAAACCGCTGGCTGTCTGCGTGATAAATGCAGAGTGTGA955954
955955GTGTTCCCCGCGCCAGCGGGGATAAACCGCAGGAATTGGGGATGTTACCTGAAGATGTGAA956015
956016GTGTTCCCCGCGCCAGCGGGGATAAACCGTTCAGAACGATTATATTTTGATTTGTGTTCAG956076
956077GTGTTCCCCGCGCCAGCGGGGATAAACCGACCGAGAGTGACATTTTCCCACTACTGGCTGG956137
956138GTGTTCCCCGCGCCAGCGGGGATAAACCGGACGCCATGCGCTACGTAGCGACGCGTGTTGA956198
956199GTGTTCCCCGCGCCAGCGGGGATAAACCGGAGAGTCGTGGTGAACTGGCAGTGCTCCGGTG956259
956260GTGTTCCCCGCGCCAGCGGGGATAAACCGAGATTGGCTATTGCGGTAGCATACTGACTCTT956320
956321GTGTTCCCCGCGCCAGCGGGGATAAACCGATTTTTTGCGGTTCAATCAGCTCATACCACAG956381
956382GTGTTCCCCGCGCCAGCGGGGATAAACCGACAAAGCCAAGCGCTATATGGCCGGTATTTTT956442
956443GTGTTCCCCGCGCCAGCGGGGATAAACCGCGCAATGAACTTTGTCGCGCCGCGAGGCGTGC956503
956504GTGTTCCCCGCGCCAGCGGGGATAAACCGATGGTAAATATGAATTTAATGTCTATCCTGGG956564
956565GTGTTCCCCGCGCCAGCGGGGATAAACCGCCATGCTCCAGGGTAGCCAACCTGCAAGTAAT956625
956626GTGTTCCCCGCGCCAGCGGGGATAAACCGATCCGACTGTATGCCCAGCAGAACGAGGGCGC956686
956687GTGTTCCCCGCGCTAGCGGGGATAAACCGCACGAGTGGCAAATTGATTTCGACGAAAAACC956747
956748GTGTTCCCCGCGCCAACAAGGATAGCCGT956776
Left flanking sequence : Till position 955650 (length bp)
AGCAAATTAGCTGTTCTTTAATAATTTAAATTGTTGTGATTATGTTGGTAGAATGTAATGCTGATAAAAA
GTAGTTTATAAACAATGATATCCGTTTAGT
Right flanking sequence : From position 956776 (length bp)
TGCATAATCATAATCTGTGTACCAGTGATGGCTGCTACAAACCTGTAAAGTAAAAAGGCCGCGTTTTTCC
GGGGAGGCTTTTATACAGGAGAAGGCCATG
Print the CRISPR sequence : From position bp To position bp