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CRISPRs details
NZ_CP012681_4
Flanking alignement tool
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NZ_CP012681_4                                                                                                                 
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Strain :
Salmonella enterica subsp. enterica serovar Typhimurium GCF_001293505
RefSeq :
NZ_CP012681 (chromosome circular)
CRISPR id :
NZ_CP012681_4
DR consensus (29 bp) :
CGGTTTATCCCCGCTGGCGCGGGGAACAC
Number of repetitions :
25
Begin Position :
3048030
End Position :
3049523
3048030
ACGGCTATCCTTGTTGGCGCGGGGAACAC
ATCTTCATATTGCGTGACGCTGCCGATGAACG
3048090
3048091
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TCTTTATCAGCTAACCATTTCCAGAACTCGTC
3048151
3048152
CGGTTTATCCCTGCTGGCGCGGGGAACAC
TATAATATGAATTAATTTTTGCGCATAACCTG
3048212
3048213
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TGCCCGTTCTGCCTCTTCGCACTCTCGATCAA
3048273
3048274
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TGCGTAATGGGCTACCTGAACTTCACATATCC
3048334
3048335
CGGTTTATCCCCGCTAGCGCGGGGAACAT
ATTAAGCGCGCAAAGTTTGGGTTAATTGGACA
3048395
3048396
CGGTTTATCCCCGCTGGCGCGGGGAACAC
CGTATTCGTCACACAGCCCCGTCCAGAAATGA
3048456
3048457
CGGTTTATCCCCGCTGGCACGGGGAACAC
TAACGAACTGAATAAAATGTCAGAAAGTGACG
3048517
3048518
CGGCTTATCCCCGCTGGCGCGGGGAACAC
GCAGCTTAGCGACGAAATTAAAACCGAACTCAC
3048579
3048580
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TGCCAGTGACTACAGAAGCGTCGCTATCGGGG
3048640
3048641
CGGTTTATCCCCGCTGGCGCGGGGAACAC
ACCGATAAACAACCGCATAGCCTCTTTCGTTT
3048701
3048702
CGATTTATCCCTGCTGGCGCGGGGAACAC
TGCTCAATAACGTCGTAAATAGCGTAAGCTGG
3048762
3048763
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TATTTCGCCTTCGGCACTGACGTCACCGTCAA
3048823
3048824
CGGTTTATCCCCGCTGGCGCGGGGAACAC
GTCGCGTTCGTTGCCGGTATAGACCAGCGTCA
3048884
3048885
CGGTTTATCCCCGCTGGCGCGGGGAACAC
ATCGAATCGAAACCCCAGCCACAGAAATAATT
3048945
3048946
CGGTTTATCCCCGCTGGCGCGGGGAACAC
GCTCATGTCAAACGCCATCAGCGTTCCGGCAT
3049006
3049007
CGGTTTATCCCCGCTAGCGCGGGGAACAC
AATCGCCAGCCTCGGAAATATTCCATCCTCCG
3049067
3049068
CGGTTTATCCCCGCTGGCGCGGGGAACAC
AGGAACTAAACAGCCTGACCGTTGAGGATCTG
3049128
3049129
CGGTTTATCCCCGCTGGCGCGGGGAACAC
ACCGGACAAATCTTTTTTTTCCTGTTCCTGTT
3049189
3049190
CGGTTTATCCCCGCTGGCGCGGGGAACAC
GGGCGGTCCCCGGCCTCAATACCGCGCTGACG
3049250
3049251
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TTGAGGTGCCGCTTGCCGTTCTTCTGTTTTTT
3049311
3049312
CGGTTTATCCCCGCTGGCGCGGGGAACAC
GGGCACTATGAACGGATCGGCGCTGATGCCGG
3049372
3049373
CGGTTTATCCCCGCTGGCGCGGGGAACAC
GGTAAAGCCACACCATTTTTTATTGACCTCGC
3049433
3049434
CGGTTTATCCCCGCTGGCGCGGGGAACAC
CTAGGAGGCGTAATGAATACTACGTATCAAAA
3049494
3049495
CGGTTTATCCCCGCTGGCGCGGGGAACAC
3049523
Left flanking sequence : Till position 3048030 (length
bp)
CATGGCCTTCTCCTGTCTAAAAGCCTCCCCGGGAAAACGCGGCCTTTTTACTTTACAGGTTTGTAGCTGC
CATTACTGGTACACAGATTATGATTATGCA
Right flanking sequence : From position 3049523 (length
bp)
ACTAAACGGATATAATTGTTTATAAACTACTTTTTGTCAGCACCACATTCTACCAACATAATCGCAACAA
TTTAAATTATTAAAGAACAGCTAATTTGCT
Print the CRISPR sequence : From position
bp To position
bp