Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP012745_1                                                                                                                 top


Strain : Klebsiella pneumoniae subsp. pneumoniae GCF_001746535 RefSeq :NZ_CP012745 (chromosome circular)
CRISPR id : NZ_CP012745_1
DR consensus (29 bp) : GTGTTCCCCGCGCCAGCGGGGATAAACCGNumber of repetitions :42
Begin Position : 1271020 End Position : 1273547

1271020GTGTTCCCCGCGCCAGCGGGGATAAACCGGAGCAGGCACCCGCCGCAACGACGAAGAGCGC1271080
1271081GTGTTCCCCGCGCCAGCGGGGATAAACCGAAATCAGCCAGCACCACGATTCTGGGAAATTT1271141
1271142GTGTTCCCCGCGCCAGCGGGGATAAACCGACAGGCTTACCCGTATTGAGACGGTTGCTGAA1271202
1271203GTGTTCCCCGCGCCAGCGGGGATAAACCGGAAACCCCATCAGATGACCCTCCCCATGTTGGC1271264
1271265GTGTTCCCCGCGCCAGCGGGGATAAACCGTTGCCTGGTCTGCTTGGTGATGATCCGTGGTA1271325
1271326GTGTTCCCCGCGCCAGCGGGGATAAACCGTACAGAACGACTGAGGCGGCGTGTATTGCATA1271386
1271387GTGTTCCCCGCGCCAGCGGGGATAAACCGGATCTTAACTCTATTGCCAATGGCGCAATTCA1271447
1271448GTGTTCCCCGCGCCAGCGGGGATAAACCGGGCGATGCGCGCTCTGCTGGCTATCGGTAAAA1271508
1271509GTGTTCCCCGCGCCAGCGGGGATAAACCGAATGCAGCAACCGGCAAATATATCGCCGGTAA1271569
1271570GTGTTCCCCGCGCCAGCGGGGATAAACCGGGGCTGCCGCACGCCTGGGACGAGTCGAGCCC1271630
1271631GTGTTCCCCGCGCCAGCGGGGATAAACCGCCGCAATAACAAAAATAAATGAGGGTTAAAGT1271691
1271692GTGTTCCCCGCGCCAGCGGGGATAAACCGGTAAATGGGAATGAGTAGAAGAGCGTCATTGG1271752
1271753GTGTTCCCCGCGCCAGCGGGGATAAACCGCCCCCGCGCACATGCTTAAACGCGCTATCACG1271813
1271814GTGTTCCCCGCGCCAGCGGGGATAAACCGGGCATCTGTTGTGTAATGTTGAGTTTTTTTCA1271874
1271875GTGTTCCCCGCGCCAGCGGGGATAAACCGCAGGTTAAACATGTAAAAAATGACCGTCGCCG1271935
1271936GTGTTCCCCGCGCCAGCGGGGATAAACCGCACATTGCCCGGTCTGAAAAGTATTTGAAAAT1271996
1271997GTGTTCCCCGCGCCAGCGGGGATAAACCGTCCGCACAGTCAAACGCTCCAGACACCAACCC1272057
1272058GTGTTCCCCGCGCCAGCGGGGATAAACCGCCGGAACACCACCAGTAACAGCTACTGTAGGC1272118
1272119GTGTTCCCCGCGCCAGCGGGGATAAACCGTGACCCTGTTGATTTTGTTCCAGGTAATACGT1272179
1272180GTGTTCCCCGCGCCAGCGGGGATAAACCGTTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT1272240
1272241GTGTTCCCCGCGCCAGCGGGGATAAACCGGAACCTGAATTCGAAGGGTGGGTCATCCTTCC1272301
1272302GTGTTCCCCGCGCCAGCGGGGATAAACCGGGACCCCGAGCGACCCGGTCACCCTCCGACCT1272362
1272363GTGTTCCCCGCGCCAGCGGGGATAAACCGCCGTCGAACGGCGGTTATATCCATCTTGAGTC1272423
1272424GTGTTCCCCGCGCCAGCGGGGATAAACCGACCGATCCCACAATTGCGGCGGTTGAGATTGA1272484
1272485GTGTTCCCCGCGCCAGCGGGGATAAACCGGTTGGTAATTACTGCTGTGTGTTACGGATAAA1272545
1272546GTGTTCCCCGCGCCAGCGGGGATAAACCGCCGATTGTCTGGCGGTCGAGCGCCATTTGCTC1272606
1272607GTGTTCCCCGCGCCAGCGGGGATAAACCGTGCCGGACGTTGTACCTGTGAGTTAATTCTTC1272667
1272668GTGTTCCCCGCGCCAGCGGGGATAAACCGCGATAACCGGGCGTTTCGACTGAACTCACCTC1272728
1272729GTGTTCCCCGCGCCAGCGGGGATAAACCGTTAATACCAGGGGGCAGGTTCAGCAGGTCCCC1272789
1272790GTGTTCCCCGCGCCAGCGGGGATAAACCGCCGCTTTAACCCGCTCCGGCAGATCCGGGTGA1272850
1272851GTGTTCCCCGCGCCAGCGGGGATAAACCGCCCTCCGCTTTCAGGGTGTGGCTGATATCACC1272911
1272912GTGTTCCCCGCGCCAGCGGGGATAAACCGCGCGCTGCGAATTTGTTGGTCGATTTCGATCT1272972
1272973GTGTTCCCCGCGCAAGCGGGGATAAACCGTGGGTAGAGGTTAACTGGTTATTGGTCATTGA1273033
1273034GTGTTCCCCGCGCCAGCGGGGATAAACCGATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG1273094
1273095GTGTTCCCCGCGCCAGCGGGGATAAACCGCCGTTGTCAATATCTCCCGGCGTCCGCGCCAG1273155
1273156GTGTTCCCCGCGCCAGCGGGGATAAACCGCACGTCCGGAAACCACGGGTTATCCGTGTAAT1273216
1273217GTGTTCCCCGCGCCAGCGGGGATAAACCGCAGAGGTCCTTATCTTTTCAACGTCAAAGTCG1273277
1273278GTGTTCCCCGCGCCAGCGGGGATAAACCGGGGATGAGCGTTTTCCGGTGGATTCTGATGTG1273338
1273339GTGTTCCCCGCGCCAGCGGGGATAAACCGGTGATCGTCATGGATATCACTGCCGTTCCGTC1273399
1273400GTGTTCCCCGCGCCAGCGGGGATAAACCGCAGACAGACAGCAGGCAGCAAACAGGGAAGAC1273460
1273461GTGTTCCCCGCGCCAGCGGGGATAAACCGGGGTTCACTTGGGTGAAACTGAACTAACT1273518
1273519GTGTTCCCCGCATTCGCGAGGATAAGCCC1273547
Left flanking sequence : Till position 1271020 (length bp)
ATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAA
GCTATTATAAAACAGTAATATATCTTTAGT
Right flanking sequence : From position 1273547 (length bp)
GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGC
TCTAGCGATATCACTGTTTTTTTACCGTCT
Print the CRISPR sequence : From position bp To position bp