Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP012833_4                                                                                                                 top


Strain : Salmonella enterica subsp. enterica serovar Cerro str. CFSAN001588 GCF_000505365 RefSeq :NZ_CP012833 (chromosome circular)
CRISPR id : NZ_CP012833_4
DR consensus (29 bp) : GTGTTCCCCGCGCCAGCGGGGATAAACCGNumber of repetitions :25
Begin Position : 926273 End Position : 927765

926273GTGTTCCCCGCGCCAGCGGGGATAAACCGCACCGGAACTGCCTCGCCCCCCTTCAGAATTA926333
926334GTGTTCCCCGCGCCAGCGGGGATAAACCGCTTCCCTGCGAACTCTTCTGCCATCCTGAACC926394
926395GTGTTCCCCGCGCCAGCGGGGATAAACCGCCGCGTAAATTTTCAGCAGTTGATCAACCCGG926455
926456GTGTTCCCCGCGCCAGCGGGGATAAACCGCGCACTCAGGCCGGAAAAGTTATTTACGAAAT926516
926517GTGTTCCCCGCGCCAGCGGGGATAAACCGACGCGCCGCCGCCTGGCGGCTTTAACTCAGGT926577
926578GTGTTCCCCGCGCCAGCGGGGATAAACCGCAGCCTCGTCCGACACGGATCAGGGTGAGGTA926638
926639GTGTTCCCCGCGCCAGCGGGGATAAACCGCCGTGATTCGACCTCTAAATGGGTTCTCATTC926699
926700GTGTTCCCCGCGCCAGCGGGGATAAACCGAGCTTTGGGGAGGGGTTGTTTCGTTTGGTGAG926760
926761GTGTTCCCCGCGCCAGCGGGGATAAACCGTCGGTCGATCTGCATATCGATACCCGCGGTTA926821
926822GTGTTCCCCGCGCCAGCGGGGATAAACCGCACAGAAGACGATAACGGGAGATTTCCCTAAG926882
926883GTGTTCCCCGCGCCAGCGGGGATAAACCGGTGAATGCGCAGAATATAGATGGGGACATTAC926943
926944GTGTTCCCCGCGCCAGCGGGGATAAACCGCCACAGCCGCCGCGACAATAAATTAACTCACT927004
927005GTGTTCCCCGCGCCAGCGGGGATAAACCGTGATGCTGGAACATTGGGAGATGATCAACACG927065
927066GTGTTCCCCGCGCCAGCGGGGATAAACCGTTTATTTTTTATTCGATATTGTTTTTGAATAT927126
927127GTGTTCCCCGCGCCAGCGGGGATAAACCGGATTGGAAAACCAATCTCTTTGTTACCACATC927187
927188GTGTTCCCCGCGCCAGCGGGGATAAACCGATCACGCACCCGAAACCTACACCGGCTTATTC927248
927249GTGTTCCCCGCGCCAGCGGGGATAAACCGCATCCCCTGACGCTGTAGAGCCATTTCCTGTT927309
927310GTGTTCCCCGCGCCAGCGGGGATAAACCGCGACATTTCAGCGGCTATCATCGAACAGTGTG927370
927371GTGTTCCCCGCGCCAGCGGGGATAAACCGAAATGTTTAATAAATACAGCAAATGCATATCT927431
927432GTGTTCCCCGCGCCAGCGGGGATAAACCGAACTGGCATCCCTCATGGTTGAGGGATTCAGT927492
927493GTGTTCCCCGCGCCAGCGGGGATAAACCGTTCGCGCTCAACTTATGGCGGTATTAAACACC927553
927554GTGTTCCCCGCGCCAGCGGGGATAAACCGCGCTTTATCGTAACTGTTTACCCGATAGTTCT927614
927615GTGTTCCCCGCGCCAGCGGGGATAAACCGGCTATCCAGCCGAGAAATGGCAGAACCGGTAT927675
927676GTGTTCCCCGCGCCAGCGGGGATAAGTCGAGGGGCGTTCCGCAGTCGGCAAGGGCTGAAAA927736
927737ATGTTCCCCGCGTCAGCGGGGATAAACAC927765
Left flanking sequence : Till position 926273 (length bp)
TGTTGAAAATCAATAAGTTAAAGATCTTTAAAAATTAGGAAAAGTTGGTGGGTTTTTTGTGCGCTAAAAA
AGTATTTAAATTCAATTGGGTAGATTTAGA
Right flanking sequence : From position 927765 (length bp)
GTTTCACCAGCATATCAGGACGTTTTTTCCGCCTTCGCCAGCTCTTTTACCAACGGCAGCATTATCCGCA
CTACATCGCGGCTACGGCGCTCAATTCGCC
Print the CRISPR sequence : From position bp To position bp