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CRISPRs details
NZ_CP013050_4
Flanking alignement tool
Page manual
  
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NZ_CP013050_4                                                                                                                 
top
Strain :
Thermococcus barophilus CH5 GCF_001433455
RefSeq :
NZ_CP013050 (chromosome circular)
CRISPR id :
NZ_CP013050_4
DR consensus (30 bp) :
GTTCCAATAAGACTCTAAGAGAATTGAAAG
Number of repetitions :
25
Begin Position :
1545343
End Position :
1547002
1545343
GTTCCAATAAGACTCTAAGAGAATTGAAAG
GTTTAACATGCTGCTCTTTCGCTCCGTACTTTTCAA
1545408
1545409
GTTCCAATAAGACTCTAAGAGAATTGAAAG
TTATACTCATCTCCAAAGACATTCGTAATTTTCACCA
1545475
1545476
GTTCCAATAAGACTCTAAGAGAATTGAAAG
GTATGTCTCCTTTTCGCCGTTTCTACGTTTCCACCAC
1545542
1545543
GTTCCAATAAGACTCTAAGAGAATTGAAAG
ACGACAATCAGCTTTTACGATGAGAATAATACTTTGCT
1545610
1545611
GTTCCAATAAGACTCTAAGAGAATTGAAAG
AGGTAAGTATAATATAGTAGTATTGCAAATTATTAC
1545676
1545677
GTTCCAATAAGACTCTAAGAGAATTGAAAG
GATGTGTTACGCGTACTCCTCACCCGCGGGGCTGTCAAG
1545745
1545746
GTTCCAATAAGACTCTAAGAGAATTGAAAG
TCTGCAAGTTTTAAACCAGTATGCCAGCCTAAGCCTTCAA
1545815
1545816
GTTCCAATAAGACTCTAAGAGAATTGAAAG
TGAACTGAGGGAGCTATTGAACAAATTGGATTTAG
1545880
1545881
GTTCCAATAAGACTCTAAGAGAATTGAAAG
GAGGAATCGTCGGGAAGATGGGGGCGATGTTCAGCCAC
1545948
1545949
GTTCCAATAAGACTCTAAGAGAATTGAAAG
GATCCGGACGAGGCTTTTTCGATAGAAACAGATCACGA
1546016
1546017
GTTCCAATAAGACTCTAAGAGAATTGAAAG
AGCTTTTGCATGACTTTCAAGACAATCCTGTACCCCAA
1546084
1546085
GTTCCAATAAGACTCTAAGAGAATTGAAAG
CAAGGCTATGAATTGAGAGAGGCAAATGTCAGAGATCT
1546152
1546153
GTTCCAATAAGACTCTAAGAGAATTGAAAG
GCGGTGGCATTCGTGATAGGAGCAACGCAGGGGTGAG
1546219
1546220
GTTCCAATAAGACTCTAAGAGAATTGAAAG
CTTCCAAGAGAGTTCTTTGAGAGCTTGCGTGAGAA
1546284
1546285
GTTCCAATAAGACTCTAAGAGAATTGAAAG
AACGGTTATATGCGGAGTCAAACACTTCGAGAAACTTT
1546352
1546353
GTTCCAATAAGACTCTAAGAGAATTGAAAG
GGATTTTATGAAACTCTCGTGAAAATCCACGAGAGCC
1546419
1546420
GTTCCAATAAGACTCTAAGAGAATTGAAAG
AGGCTCGAATCAATGGGGCTTGTTTCTACGCATGTAA
1546486
1546487
GTTCCAATAAGACTCTAAGAGAATTGAAAG
ACTTGAGCCAGAACGACACGGAACCTTGAGAGAGAGT
1546553
1546554
GTTCCAATAAGACTCTAAGAGAATTGAAAG
TGAGCTATTGGCTTAGTTGAATCATCGCCGTAAATCT
1546620
1546621
GTTCCAATAAGACTCTAAGAGAATTGAAAG
GACGATGGAATAAGCACGGTCGCCTTGGCGGAATGAAG
1546688
1546689
GTTCCAATAAGACTCTAAGAGAATTGAAAG
GTCGAATCCGTTGTTACCCCAACATCAACCGTAAAATGTTCCAATAAGA
1546767
1546768
GTTCCAATAAGACTCTAAGAGAATTGAAAG
AACATCACGGCCACCTCGGCTTGGGCTTTGCTGTTCTCG
1546836
1546837
GTTCCAATAAGACTCTAATAGAATTGAAAG
CGTTATTTTGTGAAAATTCAGGGCGGGAGAGCTTAAAG
1546904
1546905
GTTCCAATAAGACTTTAAGAGAATTGAAAG
GAAGAACGTCGGCACTCTTTCGTATTCCTTCCAGTCCC
1546972
1546973
GTTCCAATAAGACTCTAAGAGAATTGAAAT
1547002
Left flanking sequence : Till position 1545343 (length
bp)
AGGACTTGTTTTGGCTTTGTTATTGACCCTTCAGCAAAAAGCTTTTATAATTCAAGCGTTTTTATACTCT
TATTGGGGAAATGGAGCAAAATCCCGCCCT
Right flanking sequence : From position 1547002 (length
bp)
TACTGCTCTGATTGTGCAGTCTTGATCTGTTGGACAATTTCAATAAAACTTGTCTGTCTAAATTTCTCTT
CTTTGACAAAGAACAGCCAGAAGTAGTGAT
Print the CRISPR sequence : From position
bp To position
bp