Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP013131_8                                                                                                                 top


Strain : Porphyromonas gingivalis A7A1-28 GCF_001444325 RefSeq :NZ_CP013131 (chromosome circular)
CRISPR id : NZ_CP013131_8
DR consensus (37 bp) : CTCACTATACATACACAGTCCGTAAGGCTATTAAGACNumber of repetitions :9
Begin Position : 1998549 End Position : 1999184

1998549CTCACTATACATACACAGTCCGTAAGGCTATTAAGACATTTTGACGCATTAAATCTTTTAAGATTTGATTAA1998620
1998621CTCACTATACATACACAGTCCGTAAGGCTATTAAGACCCATAATGCACACATTATAAGACCGCCTAATTCTTTT1998694
1998695CTCACTATACATACACAGTCCGTAAGGCTATTAAGACTTTTCTATTACCCAAGGATTATCTACCTCTTTCATGGAGG1998771
1998772CTCACTATACATACACAGTCCGTAAGGCTATTAAGACTTCATAGGTTGAAGAAAATACATTAGGTACTTTCCTA1998845
1998846CTCACTATACATACACAGTCCGTAAGGCTATTAAGACTCCATAAAGAGTGATGTTAAGGATGTCACTACTGCCG1998919
1998920CTCACTATACATACACAGTCCGTAAGGCTATTAAGACTTTAATAGTAGCACCTTCAAGAATCAACTTTTGAATAACCT1998997
1998998CTCACTATACATACACAGTCCGTAAGGCTATTAAGACTTTTTCATATTCATCTCCAGCATTAAATTCAATTTGTT1999072
1999073CTCACTATACATACACAGTCCGTAAGGCTATTAAGACCTTATCGTTTTCTAGATTAAATAACCTCTCTATTTCTT1999147
1999148CTCACTATACATACACAGTCCGTAAGGCTATTAAGTC1999184
Left flanking sequence : Till position 1998549 (length bp)
TGTAGCTGCATTTCTCAACTTGTATTTTCGAAAAAAATAGAATCGTTCTCTGCCAATGCGTTACGTTTGG
GATTATTCGTAACTTGCAGTCGCTCAAGTA
Right flanking sequence : From position 1999184 (length bp)
ACTGATTACCGAGGGTTAGAACGAATGCATACACAGAGTGTTCTGGAAGCGATGGCCTACAATCTTAAGC
GCATGCCCGGGCTTCTTGTGCTCTATGGCA
Print the CRISPR sequence : From position bp To position bp