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CRISPRs details
NZ_CP013670_1
Flanking alignement tool
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NZ_CP013670_1                                                                                                                 
top
Strain :
Xanthomonas oryzae pv. oryzae GCF_001746595
RefSeq :
NZ_CP013670 (chromosome circular)
CRISPR id :
NZ_CP013670_1
DR consensus (31 bp) :
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
Number of repetitions :
68
Begin Position :
862174
End Position :
866597
862174
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TCTGCGACGGGGTTACCAGCTCCAGCCCGTCGCG
862238
862239
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GGTATCCCAGCAAAGACTTGCTCATACCCGTCGGGC
862305
862306
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GGCGGACAACATTGTGGGTCTTCCGGGATGCGGT
862370
862371
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CCGTCAATCTGCTCGCCGTTGAACACCGTCGCAAA
862436
862437
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TCGCACCGACAGCGCCCTGATTGAGTATGTGCAG
862501
862502
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GTGGCGCGAGCGCTATAACAAGCGCTCGTTCTACGT
862568
862569
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CGCTTCACGGGCCGTGGATACGTTACTACCCAT
862632
862633
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TTGGATCGAACCGGAGGAACGCGCCTTGAGGTCGG
862698
862699
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GTCATCGCCGCTTGGCTCTTCGAGCTAGTCAGCTT
862764
862765
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GCGGTCGTTTCGCCTGCGACTCGACGTGGGCCAC
862829
862830
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CAGCAGCGTGCCCGCGCCGTTCCGCGTATAGAAC
862894
862895
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
ATGAGCATCCAGGTCGTCCCGCTCGCCCCGCGCCC
862960
862961
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GACAGCGGCGCGCAAGTCACGAACGTCAGCATCCA
863026
863027
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CATCACGCAGCACGGGCACGAGGCTTACAACGCGTT
863093
863094
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CTAGCGTCTGACGGCACCGCCGATGTCCCCGTGCC
863159
863160
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GAGGCGCAACGTACGCACGCCGCCGCCGTCGGTGTG
863226
863227
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TGTGCCTAGATTTAGGCACAATAGGCACCAAGGG
863291
863292
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TGATAGACGGCCAGATGTATTTACTGCCCGCAAGGA
863358
863359
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CTGACCTCTGCTTAGGACTTGCCCAGTTGAAAGG
863423
863424
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CTTTCCCACATCTCCATATCCGCCGTCTCCCAGAG
863489
863490
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
ACGGACGGTCAGACGTGCATCCGGCGGGGTGAGG
863554
863555
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CAGGTCTATACAGTAACTGCGGATCTGACAGCA
863618
863619
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GCTGCAATTGATGCTGCCCCAGCCCCGTAGGCTCTG
863685
863686
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CTCAGCGGCCACTTCGCCGCAGCCTGGTAGGCCAA
863751
863752
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TTCCGAACCTCCGGATCGATTGGTCGGGCGGAATA
863817
863818
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CGCCAACTGCTTACGGTCTGCGGCGCGAACGCGGCG
863884
863885
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GCGGCGGCGCGAAGTGGTCGGCGCAGTGGGACAC
863949
863950
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GGACACGTTTCTTTTCCTTCCGGTATTTGTAGAT
864014
864015
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
ACGCTCGGGATTTGGTGACATGCTAGTTTTCAAC
864079
864080
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GTGGGTCTGCCCTTACACTGTCGGCGGCTGGCTT
864144
864145
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GAACAACCGCCTGATCCGTGGTTTGAAGGTCAAG
864209
864210
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
ACATGCATACATACTGGCACAGGCAGGCACCCAT
864274
864275
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
ACGGCTCGTTCGCCTGATTATAAGGGAGGGGCTGGG
864341
864342
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GGGTACAGCGAAGAGTACGACCCGGCAATTGAGC
864406
864407
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TCGGCGGCCGGCACGGACAACCCTTTCGGCTGAGC
864472
864473
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CGGCGGTCGCGGGTCAGACTGTCATGATCGGTAA
864537
864538
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CGCCAGCAACCGCCTTGCTTGTCAAAGCCTTGTCC
864603
864604
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CTTCCATAATCGTCAATAGGTCCAGATCGGAGCCG
864669
864670
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GTCGGTCTGTCGACTGCTTCGGGCGCCTACGTC
864733
864734
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GTGGCAGTGTTACCATGTGCTTTCCGCATTGCCAT
864799
864800
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CCTTACTTTTTCAATTGGCAGTCCAGTATACGCA
864864
864865
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
AAGCGGTGCGCTGAATCTGTCTTGCGGCGTTGAT
864929
864930
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TCGCGCCATCCTCTTCCTGCGCCTCGCTGTTGTA
864994
864995
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CAGATCATCGATGCCGCGCGCTTCGCGATCGAGGT
865060
865061
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TTGTAGGTGATCCGGGCGGCATCTGCGAAGTCGG
865125
865126
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TCAAGGACAGCAAGACAGCCAAGGCTGGTGCATGT
865191
865192
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CAAATAGAATTCGTCCAATCACTTGTCGAGAGTG
865256
865257
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GCGAGGAATGCAAGGCTGCCTGAGGTCCAAAAC
865320
865321
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GAGTGTATGTCCCTGGTGATGTGCCTGATGCGAA
865385
865386
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GTGATATCCCTTGCTCTCACTCCAACTGCGGCCA
865450
865451
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
AACGGTCGGCGTTCTCCGCGTTCGAGGAGGACCT
865515
865516
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TGAAGAAGACTAAAACTGTAGTGACATCCAATGT
865580
865581
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CCGGCGCCCGTAAAGCGCGCGGTCATCGATGGCAAA
865647
865648
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CCTTGAAATGCCAAGGTACTGTGCAGTATCCCTCT
865713
865714
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
ACGCGACGGTCGACGAACGTGGTCATCCACGCCG
865778
865779
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TGGCGAGGCGGCGTAGACACCCCCGGGATTAAG
865842
865843
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CCGACCGCTGCTTCGGTGACGACCAGTTAAACTC
865907
865908
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GTCAGCATGTCTGGTAGCTGGGGGCGTAATCAGCT
865973
865974
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GTAATACGGCAGGCATTGGTAAGCCTGCTTTCGAA
866039
866040
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
ATCTACATGGTTACATTCAGGTTAGGGTGAGTGG
866104
866105
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TTGGAGAGTCAATACAAGGATGCTTGAGGCACTG
866169
866170
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GACCATGGCAAGTTCGCGGGCAAGGCGCTCTGGCGG
866236
866237
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CTGCCCAACCACACAGCGCGCCCATAAATCCACA
866301
866302
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TGCATTGCTTGCTGATCTGCGCATGCGCGCTCAT
866366
866367
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TGCTGCTCCTGAAGTTGCCAATACCGGCATTGTAGAC
866434
866435
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TTGCTCAGCTTTGCAATTTCAGCCAGGGCTGCTGG
866500
866501
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GGGTCAGGGATCAACCCACAGGGGTCAGACCTTCA
866566
866567
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
866597
Left flanking sequence : Till position 862174 (length
bp)
GTTGTCCGACATTGCAGCTCGACCAGAATTGGTGCGCTCGTTCTTCACGCATCCAAGTGTCGCCTATATT
TCTGACTTATGAGTAATGCTGACGCGTCAT
Right flanking sequence : From position 866597 (length
bp)
GCCGCCAGCATAAGTGCTTGCGCGTCTTGAGGGAAAACCCGTCATTTCGCGAACAGGAACGCGAACAGGT
TCCATGCCTTGCAAATATGAGCACCCGCGA
Print the CRISPR sequence : From position
bp To position
bp