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CRISPRs details
NZ_CP013674_1
Flanking alignement tool
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NZ_CP013674_1                                                                                                                 
top
Strain :
Xanthomonas oryzae pv. oryzae GCF_001746635
RefSeq :
NZ_CP013674 (chromosome circular)
CRISPR id :
NZ_CP013674_1
DR consensus (31 bp) :
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
Number of repetitions :
91
Begin Position :
4242152
End Position :
4248077
4242152
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
ATCCTGGAGCAGCGCCAGTGCAACGATTTCACAG
4242216
4242217
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
CCTCGCACCGGGCGCGGTAGCTGTCAGCACCGGC
4242281
4242282
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
TTGGGTATCCCCAAGAACAAGCTGCGGTTAGAGGGA
4242348
4242349
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
CTCATCACAGGTGCAAACCGATATGGGTACGACAA
4242414
4242415
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
TGGCCCTGTGCAATGACCCATTGCCACTGGCATC
4242479
4242480
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
TGCAAGTCCGAGCCCTGTGGGTTGATCCCTGAGCCC
4242546
4242547
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
GTGCTTATCCTCCGTGGCTCTTCCATAATCACAC
4242611
4242612
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
GTGCAGTCACTTGTTGAGAGTGGCAAGCAGACTGA
4242677
4242678
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
CTAAAAACAAGCTCAGGCTAGAGGGACGGCGGA
4242741
4242742
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
AACTGGGCAAGTCCTAAGCAGAGGTCAGCGCTGTT
4242807
4242808
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
CACCGTAACACACCCGTCAGGGGATCATAAGCCA
4242872
4242873
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
TGGGTGCAGCATTTTTAGGGGATGTTGAGCACAA
4242937
4242938
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
TTGGTTGGCGCCTTTGACCTGGCTGCGCAGATCTTT
4243004
4243005
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
TCTGCTGCTTTCGGCGTGGATTACAACAGCCTCAGCG
4243072
4243073
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
GCGGGCAAGGCGCTGTGGCGGGAATGTCAGAAGG
4243137
4243138
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
ACCTTGCAGCCCTTAGCTTTGCAATACCCCTCAT
4243202
4243203
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
AGCACTGTGCTTGGCGGTATCGGCGGCGGTGCAGG
4243268
4243269
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
GGTGGCAGAGTATATGCAGATATCCCACCCGATT
4243333
4243334
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
TTCGGCGTCCCGCCGAGCATGATTGGGCACAGCAGT
4243400
4243401
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
TGTTGGTGACGCGCCACCTTCCACGCCCGGTGATGG
4243467
4243468
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
GTGCATTACTTCACCAAAGATCGCGCCGACCCCA
4243532
4243533
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
CGGGGTCTTATAGCGATAACTGGACGATCGAGCAGG
4243599
4243600
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
ACCTGTGGCGCGTGCGTATCACCGACCGCGACGG
4243664
4243665
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
TCGCGAATAGGCGCGGTCCAGGGCCACGCAGTGG
4243729
4243730
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
CCAGGTAGGTGCCAGTGGCCACAACTTGGAAGAT
4243794
4243795
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
TGGTTACAGATGATCATGGGCGATCAGGCCGACA
4243859
4243860
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
CGCAAACCAGATGGCAAGTGGCAGCGGGGCAGCAAC
4243926
4243927
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
ACTAGCAGCCAGTTTGGCAGGCTGCTTTGCAGC
4243990
4243991
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
AGGAAACGGTCGCCATTGGGCAAGCTGCGGCGCA
4244055
4244056
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
TTGGGAGCCTATTAATAACATCTAGGACAACCCG
4244120
4244121
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
CGTCAATTGTGGTGACAGTTGTTTGCAGGGCAC
4244184
4244185
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
TTGCAAAAAAGCAGCCAAGCCGCCGGGAGTTTGT
4244249
4244250
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
CCATTTACACCAAGGCCTGCCGGCGAGGTTGCATA
4244315
4244316
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
TGACTATGACTCTGTCGCCCTGGCTGCGCCGTAT
4244380
4244381
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
CGCCGACTCTAGGGCAATGCGCGTTGCTGGAGGG
4244445
4244446
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
AAGCTTGATCTTGTTGGCATAGGACCAGCGCGGAA
4244511
4244512
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
GTCTGGAATACACCACTTACCCGACTCATCCTGC
4244576
4244577
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
CTTAATCCCGGAGATGTATACGCCACTTCGCCGGC
4244642
4244643
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
CACGCCCGGTGATGGTGATGGCCACGGTGATGACC
4244708
4244709
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
GCCTTGCTCATGCCGTTGGCGCTGTAGTCCCCGTAG
4244775
4244776
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
CCAGATGCTTGACATGCATGAGCAGGGTGTGTTA
4244840
4244841
TTCGCGTCCTCACGGGCGCGTGGATTGAAAC
CGGATGTTCGCCGGCGTGCATGTTGTATGGCGCAC
4244906
4244907
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
CTTGAGGACTCGTCGGGCCGCCAGCTGTCTGTCC
4244971
4244972
GTCTCGTCCTCACGGGCGCGTGGATTGAAAC
TGCTGCATGCTTGCGTGCCAATGTAACCTGCACA
4245036
4245037
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
ACGGTGGCTGTTAGCTCCAGTACTGTGCTTGCAG
4245101
4245102
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
TGGCTGATCAGGCTGCTGGAGTAGATCCAGCTG
4245165
4245166
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
ATATAGATACTGCCTGCACCTAGGCTACCCACTA
4245230
4245231
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
TGCATCGCCTCGGCGAGCGCGATGATGAGCGCGC
4245295
4245296
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
CCATTTACAGACAGACCTGAGGGCGAAGTGGCGTA
4245361
4245362
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
CCAAATCGGAGGTCTGCACTGGCATATGCTGAC
4245425
4245426
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
GTTAAGGAAGCTCATGCAGTTGCCCAGGCTCGT
4245489
4245490
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
GTCCTGGGACGCCTCGCCGGCAGCGTCGCAGGCATG
4245556
4245557
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
ACCTTCCCCGCGATGCGGCCGATGCGCTGCAGGC
4245621
4245622
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
TATTTCGCACGAGATGCGTGCAGCACCTGCGATC
4245686
4245687
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
AGCTGCGTTGGTCCGACCACTCTGGTGCGAGGTTA
4245752
4245753
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
TCGGCGACGTGGAGCACAAGACCAGCAAGAGTGGC
4245818
4245819
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
CCATGCGGCGAGGTTTCCACGCTGACACTCCCG
4245882
4245883
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
AGCACTGTGTTAGGTGGTATTGGTGGCTCGGGAT
4245947
4245948
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
TTAGCCACGATGGCATAAATGTCACTTGGCAGAT
4246012
4246013
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
TGAGACTTGTCTCTGAGGCACCAGATATGCAGGTG
4246078
4246079
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
ACATCGTTCGACAGGGTGATGGCGTTCGGTTGCA
4246143
4246144
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
CGCGCCAAGGGGGCACCTGCCCGCTCCAACTCCTC
4246209
4246210
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
TTCGTGCAGCTGGTTGGGTGATCTTCGCCATTGCC
4246275
4246276
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
TCACGAATAGGCGCGGTCCAGGGCCACGCAGTGGC
4246341
4246342
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
GCCAACGCGAAACCTCTGAAACGTTGCATTGCTG
4246406
4246407
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
TCAGCGCGTGTGGAGCGTTATCCGTAGGGGCGCT
4246471
4246472
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
CCGACGTTGGCCAGCCTCTACGAAGGCGCTGTAGCC
4246538
4246539
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
AGGTGTTGCGCGCTGTCAAAGCGTCTGCACGCGT
4246603
4246604
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
ACCAAAGATCGCGCCGACCCCAATAAGCCGGTGGCC
4246670
4246671
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
AAGATTGGACCCTCGCTGGTGATGATCGGCGCGGC
4246736
4246737
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
ATTTCATGAGCGCGCATGCGCAGATCAGCAAGCAA
4246802
4246803
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
GTGATGGTGCTGGAACAGGCGTTGTCGGCTGTGCTG
4246869
4246870
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
TAGATCGCCCACAAAGGACCGTGGATATGTGGACA
4246935
4246936
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
TTTCGCGGCGTGATCACCTGGTCGGCGATTAACG
4247000
4247001
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
TATACGGAGCGTGGAGGGTGATCTTAAGGTTGC
4247064
4247065
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
ACCATCTGCGTTTCTGCATCGCTGAAAAGGCCGC
4247129
4247130
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
ATCGTGCGGCATTGCCCAACGCCTGATGCGTTGC
4247194
4247195
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
TGGATGCTGACGTTCGTGACTTGCGCGCCGCTGTC
4247260
4247261
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
GGGCGCGGGGCGAGCGGGACGACCTGGATGCTCAT
4247326
4247327
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
GTTCTATACGCGGAACGGCGCGGGCACGCTGCTG
4247391
4247392
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
GTGGCCCACGTCGAGTCGCAGGCGAAACGACCGC
4247456
4247457
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
ACGTTCAAGCCGCTCGCCCTGGGCGACCGGTGGGA
4247522
4247523
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
CCGACCTCAAGGCGCGTTCCTCCGGTTCGATCCAA
4247588
4247589
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
ATGGGTAGTAACGTATCCACGGCCCGTGAAGCG
4247652
4247653
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
ACGTAGAACGAGCGCTTGTTATAGCGCTCGCGCCAC
4247719
4247720
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
CTGCACATACTCAATCAGGGCGCTGTCGGTGCGA
4247784
4247785
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
ACCGCATCCCGGAAGACCCACAATGTTGTCCGCC
4247849
4247850
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
GCCCGACGGGTATGAGCAAGTCTTTGCTGGGATACC
4247916
4247917
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
CGCGACGGGCTGGAGCTGGTAACCCCGTCGCAGA
4247981
4247982
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
GAGTGCCCGGGGTCGGTGTCGGCGCAGGCTGGCC
4248046
4248047
GTCGCGTCCTCACGGGCGCGTGGATTGAAAC
4248077
Left flanking sequence : Till position 4242152 (length
bp)
TCGCGGGTGCTCATATTTGCAAGGCATGGAACCTGTTCGCGTTCCTGTTCGCGAAATGACGGGTTTTCCC
TCAAGACGCGCAAGCACTTATGCTGGCGGC
Right flanking sequence : From position 4248077 (length
bp)
ATGACGCGTCAGCATTACTCATAAGTCAGAAATATAGGCGACACTTGGATGCGTGAAGAACGAGCGCACC
AATTCTGGTCGAGCTGCAATGTCGGACAAC
Print the CRISPR sequence : From position
bp To position
bp