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CRISPRs details
NZ_CP013676_1
Flanking alignement tool
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NZ_CP013676_1                                                                                                                 
top
Strain :
Xanthomonas oryzae pv. oryzae GCF_001746675
RefSeq :
NZ_CP013676 (chromosome circular)
CRISPR id :
NZ_CP013676_1
DR consensus (31 bp) :
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
Number of repetitions :
75
Begin Position :
865026
End Position :
869901
865026
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GGCCAGCCTGCGCCGACACCGACCCCGGGCACTC
865090
865091
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TCTGCGACGGGGTTACCAGCTCCAGCCCGTCGCG
865155
865156
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GGTATCCCAGCAAAGACTTGCTCATACCCGTCGGGC
865222
865223
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GGCGGACAACATTGTGGGTCTTCCGGGATGCGGT
865287
865288
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TCGCACCGACAGCGCCCTGATTGAGTATGTGCAG
865352
865353
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GTGGCGCGAGCGCTATAACAAGCGCTCGTTCTACGT
865419
865420
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CGCTTCACGGGCCGTGGATACGTTACTACCCAT
865483
865484
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TTGGATCGAACCGGAGGAACGCGCCTTGAGGTCGG
865549
865550
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TCCCACCGGTCGCCCAGGGCGAGCGGCTTGAACGT
865615
865616
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GCGGTCGTTTCGCCTGCGACTCGACGTGGGCCAC
865680
865681
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CAGCAGCGTGCCCGCGCCGTTCCGCGTATAGAAC
865745
865746
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
ATGAGCATCCAGGTCGTCCCGCTCGCCCCGCGCCC
865811
865812
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GACAGCGGCGCGCAAGTCACGAACGTCAGCATCCA
865877
865878
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GCAACGCATCAGGCGTTGGGCAATGCCGCACGAT
865942
865943
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GCGGCCTTTTCAGCGATGCAGAAACGCAGATGGT
866007
866008
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GCAACCTTAAGATCACCCTCCACGCTCCGTATA
866071
866072
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CGTTAATCGCCGACCAGGTGATCACGCCGCGAAA
866136
866137
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TGTCCACATATCCACGGTCCTTTGTGGGCGATCTA
866202
866203
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CAGCACAGCCGACAACGCCTGTTCCAGCACCATCAC
866269
866270
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TTGCTTGCTGATCTGCGCATGCGCGCTCATGAAAT
866335
866336
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GCCGCGCCGATCATCACCAGCGAGGGTCCAATCTT
866401
866402
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GGCCACCGGCTTATTGGGGTCGGCGCGATCTTTGGT
866468
866469
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
ACGCGTGCAGACGCTTTGACAGCGCGCAACACCT
866533
866534
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TGGTGAAATTGTAGAAGCATCCATCGTCACAACTA
866599
866600
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GCCACTGCGTGGCCCTGGACCGCGCCTATTCGTGA
866665
866666
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GAGGAGTTGGAGCGGGCAGGTGCCCCCTTGGCGCG
866731
866732
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TGCAACCGAACGCCATCACCCTGTCGAACGATGT
866796
866797
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CTACGGGGACTACAGCGCCAACGGCATGAGCAAGGC
866863
866864
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GGTCATCACCGTGGCCATCACCATCACCGGGCGTG
866929
866930
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GCCGGCGAAGTGGCGTATACATCTCCGGGATTAAG
866995
866996
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GCAGGATGAGTCGGGTAAGTGGTGTATTCCAGAC
867060
867061
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
AGTGGGATACCCTTGCGCTCGGCACTGTCCGTGG
867125
867126
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
AGGATCTGGAGCTGATGGATCAACCAATGTGAC
867189
867190
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GCAGGTGTATACAGTAACTGCGGACCTAACAGCA
867254
867255
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TTCCGCGCTGGTCCTATGCCAACAAGATCAAGCTT
867320
867321
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CCCTCCAGCAACGCGCATTGCCCTAGAGTCGGCG
867385
867386
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
ATACGGCGCAGCCAGGGCGACAGAGTCATAGTCA
867450
867451
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CCGTCGCGGTCGGTGATACGCACGCGCCACAGGT
867515
867516
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CCTGCTCGATCGTCCAGTTATCGCTATAAGACCCCG
867582
867583
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TGGGGTCGGCGCGATCTTTGGTGAAGTAATGCAC
867647
867648
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CCATCACCGGGCGTGGAAGGTGGCGCGTCACCAACA
867714
867715
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
ACTGCTGTGCCCAATCATGCTCGGCGGGACGCCGAA
867781
867782
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
AATCGGGTGGGATATCTGCATATACTCTGCCACC
867846
867847
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CCTGCACCGCCGCCGATACCGCCAAGCACAGTGCT
867912
867913
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
ATGAGGGGTATTGCAAAGCTAAGGGCTGCAAGGT
867977
867978
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CCTTCTGACATTCCCGCCACAGCGCCTTGCCCGC
868042
868043
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CGCTGAGGCTGTTGTAATCCACGCCGAAAGCAGCAGA
868110
868111
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
AAAGATCTGCGCAGCCAGGTCAAAGGCGCCAACCAA
868177
868178
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TTGTGCTCAACATCCCCTAAAAATGCTGCACCCA
868242
868243
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TGGCTTATGATCCCCTGACGGGTGTGTTACGGTG
868307
868308
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
AACAGCGCTGACCTCTGCTTAGGACTTGCCCAGTT
868373
868374
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TCCGCCGTCCCTCTAGCCTGAGCTTGTTTTTAG
868437
868438
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CGCCACGGTCAACAGCTGTGCAGAGGCAGGCATT
868502
868503
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TCAGTCTGCTTGCCACTCTCAACAAGTGACTGCAC
868568
868569
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GTGTGATTATGGAAGAGCCACGGAGGATAAGCAC
868633
868634
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GGGCTCAGGGATCAACCCACAGGGCTCGGACTTGCA
868700
868701
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TCCCCAGTACCTTTCGTGTTCACGCTCAAAACC
868764
868765
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CACCTCAGTGGGCGGTTCGACAAAGTGTTCGGGCAG
868831
868832
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TACGGTATTTGTAGATAAACTCCTGCACCCTGA
868895
868896
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CACCCATACCAGTGTCATTTTTGGGGTTGGTATA
868960
868961
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TGCCATAGGTGACGACGCTGACGCTGTAACCAAGG
869026
869027
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
AGCGGCACACCTGAACTCTATGGGTCTTTGGAAA
869091
869092
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GCTAGCCTATTGGCAAGCACGCTCGCAGACACT
869155
869156
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
ACATGCACCCGCCTTGGCCGTCTTGCTGTCCTT
869219
869220
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TATTGGCCTGTCCCTGGATCAATGCCCGCACCGT
869284
869285
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
CGGTGTGCAGCTAACCTTTAGCAGCACGGCAAC
869348
869349
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
ACCAACGGATTTCCTGAAGATTGCAGAGTATCCA
869413
869414
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
ATAAGCGTCGGTTCGGGGTACTCTACGAACATCCA
869479
869480
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
ATATGAGAGATACTTACTGAGTGTAGAGCAAGA
869543
869544
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TACCCAACTACTGAGACAGAGAGACTAGACAAT
869607
869608
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
GCATTGTTGTAGGAGACGCCGTGGGTGCTGTTGGT
869673
869674
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TGCACAAACGCAAGGCCTCACCATTTGATGTCCA
869738
869739
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
TACGCCATCGTGGCGAAGAGGACACAGCAACGGCTT
869805
869806
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
ATACTTCAGAGTTGAGTTGTGACTGGGCGTCAGC
869870
869871
GTTTCAATCCACGCGCCCGTGAGGACGCGAC
869901
Left flanking sequence : Till position 865026 (length
bp)
GTTGTCCGACATTGCAGCTCGACCAGAATTGGTGCGCTCGTTCTTCACGCATCCAAGTGTCGCCTATATT
TCTGACTTATGAGTAATGCTGACGCGTCAT
Right flanking sequence : From position 869901 (length
bp)
CCCGCCAGCATAAGTGCTTGCGCGTCTTGAGGGAAAACCCGTCATTTCGCGAACAGGAACGCGAACAGGT
TCCATGCCTTGCAAATATGAGCACCCGCGA
Print the CRISPR sequence : From position
bp To position
bp