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CRISPRs details
NZ_CP013720_5
Flanking alignement tool
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NZ_CP013720_5                                                                                                                 
top
Strain :
Salmonella enterica subsp. enterica serovar Typhimurium GCF_002009155
RefSeq :
NZ_CP013720 (chromosome circular)
CRISPR id :
NZ_CP013720_5
DR consensus (29 bp) :
CGGTTTATCCCCGCTGGCGCGGGGAACAC
Number of repetitions :
36
Begin Position :
3128304
End Position :
3130469
3128304
ACGGCTATCCTTGTTGGCGCGGGGAACAC
ATCTTCATATTGCGTGACGCTGCCGATGAACG
3128364
3128365
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TCTTTATCAGCTAACCATTTCCAGAACTCGTC
3128425
3128426
CGGTTTATCCCTGCTGGCGCGGGGAACAC
TCTTTATCAGCTAACCATTTCCAGAACTCGTC
3128486
3128487
CGGTTTATCCCTGCTGGCGCGGGGAACAC
TATAATATGAATTAATTTTTGCGCATAACCTG
3128547
3128548
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TGCCCGTTCTGCCTCTTCGCACTCTCGATCAA
3128608
3128609
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TGCGTAATGGGCTACCTGAACTTCACATATCC
3128669
3128670
CGGTTTATCCCCGCTAGCGCGGGGAACAT
ATTAAGCGCGCAAAGTTTGGGTTAATTGGACA
3128730
3128731
CGGTTTATCCCCGCTGGCGCGGGGAACAC
CGTATTCGTCACACAGCCCCGTCCAGAAATGA
3128791
3128792
CGGTTTATCCCCGCTGGCACGGGGAACAC
TAACGAACTGAATAAAATGTCAGAAAGTGACG
3128852
3128853
CGGCTTATCCCCGCTGGCGCGGGGAACAC
GCAGCTTAGCGACGAAATTAAAACCGAACTCAC
3128914
3128915
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TGCCAGTGACTACAGAAGCGTCGCTATCGGGG
3128975
3128976
CGGTTTATCCCCGCTGGCGCGGGGAACAC
ACCGATAAACAACCGCATAGCCTCTTTCGTTT
3129036
3129037
CGATTTATCCCTGCTGGCGCGGGGAACAC
TGCTCAATAACGTCGTAAATAGCGTAAGCTGG
3129097
3129098
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TATTTCGCCTTCGGCACTGACGTCACCGTCAA
3129158
3129159
CGGTTTATCCCCGCTGGCGCGGGGAACAC
GTCGCGTTCGTTGCCGGTATAGACCAGCGTCA
3129219
3129220
CGGTTTATCCCCGCTGGCGCGGGGAACAC
ATCGAATCGAAACCCCAGCCACAGAAATAATT
3129280
3129281
CGGTTTATCCCCGCTGGCGCGGGGAACAC
GCTCATGTCAAACGCCATCAGCGTTCCGGCAT
3129341
3129342
CGGTTTATCCCCGCTAGCGCGGGGAACAC
AATCGCCAGCCTCGGAAATATTCCATCCTCCG
3129402
3129403
CGGTTTATCCCCGCTGGCGCGGGGAACAC
AGGAACTAAACAGCCTGACCGTTGAGGATCTG
3129463
3129464
CGGTTTATCCCCGCTGGCGCGGGGAACAC
ACCGGACAAATCTTTTTTTTCCTGTTCCTGTT
3129524
3129525
CGGTTTATCCCCGCTGGCGCGGGGAACAC
GGGCACTATGAACGGATCGGCGCTGATGCCGG
3129585
3129586
CGGTTTATCCCCGCTGGCGCGGGGAACAC
GGTAAAGCCACACCATTTTTATTGACCTCGC
3129645
3129646
CGGTTTATCCCCGCTGGCGCGGGGAACAC
CTAGGAGGCGTAATGAATACTACGTATCAAAA
3129706
3129707
CGGTTTATCCCCGCTGGCGCGGGGAACAC
GTGGTGGCCTCAAATAAATTCGAGCGCTGGAG
3129767
3129768
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TCGACGTGGACGAGGAGTTACTCAACCGCTGC
3129828
3129829
CGGTTTATCCCCGCTGGCGCGGGGAACAC
AGCGCCACATGGCCCACCGGCACCACCCGATC
3129889
3129890
CGGTTTATCCCCGCTGGCGCGGGGAACAC
AAATAGACCAAATCAGAAATACTTCTACCAAAGCC
3129953
3129954
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TAATAGGCCACAGTAAGTCAAACGGTTCTGGAA
3130015
3130016
CGGTTTATCCCCGCTGGCGGGGAACACGA
GTCCGGGGGTTATATAGTTATTTAATGAGC
3130074
3130075
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TTGGGCGTCGGTTTTTTCAGGTTTAGGTCCGG
3130135
3130136
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TCAACTGTCAGTTCGTCGTTAGCCAGTAATTC
3130196
3130197
CGGTTTATCCCCGCTGGCGCGGGGAACAC
CTGAAAACGCATGGAATCCGGTATAAACAGTC
3130257
3130258
CGGTTTATCCCCGCTGGCGCGGGGAACAC
GATGTAACTGATAGCGAAATATATTGGGATAA
3130318
3130319
CGGTTTATCCCCGCTGGCGCGGGGAACAC
GAAACGTAAACAGGGTAAGATACAACTCTGCA
3130379
3130380
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TGTAAAGGGTGGTCTGGAAGGGGATCGGCAAA
3130440
3130441
CGGTTTATCCCCGCTGGCGCGGGGAACAC
3130469
Left flanking sequence : Till position 3128304 (length
bp)
CATGGCCTTCTCCTGTCTAAAAGCCTCCCCGGGAAAACGCGGCCTTTTTACTTTACAGGTTTGTAGCTGC
CATTACTGGTACACAGATTATGATTATGCA
Right flanking sequence : From position 3130469 (length
bp)
ACTAAACGGATATAATTGTTTATAAACTACTTTTTGTCAGCACCACATTCTACCAACATAATCGCAACAA
TTTAAATTATTAAAGAACAGCTAATTTGCT
Print the CRISPR sequence : From position
bp To position
bp