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CRISPRs details
NZ_CP014201_6
Flanking alignement tool
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NZ_CP014201_6                                                                                                                 
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Strain :
Lactobacillus rhamnosus GCF_001988935
RefSeq :
NZ_CP014201 (chromosome circular)
CRISPR id :
NZ_CP014201_6
DR consensus (36 bp) :
GCTCTTGAACTGATTGATCTGACATCTACCTGAGAC
Number of repetitions :
18
Begin Position :
1389288
End Position :
1390446
1389288
TCACTGAAGGTTTTTGATCTGACATCTACCTGAGAC
TGCCGCGTCGATCTTTGTCAATACCCGAGT
1389353
1389354
GTTCTTGAACTGATTGATCTGACATCTACCTGAGAC
TCACCGACTGTCAGCGCCAGTTCTTCGCCT
1389419
1389420
GTTCTTGAACTGATTGATCTGACATCTACCTGAGAC
AATACACCGTAATCAATTTCTTTCAGGGCT
1389485
1389486
GTTCTTGAACTGATTGATCTGACATCTACCTGAGAC
ACAACATCCAAGTGGTATCATTCTAAACGT
1389551
1389552
GCTCTTGAACTGATTGATCTGACATCTACCTGAGAC
AAGAAGAGTGATATTGCTTCCATGACACTT
1389617
1389618
GCTCTTGAACTGATTGATCTGACATCTACCTGAGAC
TAGGCGACTGATGACAAGTCTCTTATGCTG
1389683
1389684
GCTCTTGAACTGATTGATCTGACATCTACCTGAGAC
TACCAAGCCTGATGGCGATGCCATTCAAGA
1389749
1389750
GCTCTTGAACTGATTGATCTGACATCTACCTGAGAC
AGTAAGCAAATCAATGACAATAAGAATGGG
1389815
1389816
GCTCTTGAACTGATTGATCTGACATCTACCTGAGAC
ATCATCGTCTTCAAATCCGCAAGTGTTACC
1389881
1389882
GCTCTTGAACTGATTGATCTGACATCTACCTGAGAC
TGGCGGCTGCCAAATCTGCAATGCTACTTT
1389947
1389948
GCTCTTGAACTGATTGATCTGACATCTACCTGAGAC
TGAGACGTCTTCCGTGGCTCAAGCAAGGCG
1390013
1390014
GCTCTTGAACTGATTGATCTGACATCTACCTGAGAC
GATGCAGCGCATCAATCGCGGCTTGTGCTT
1390079
1390080
GCTCTTGAACTGATTGATCTGACATCTACCTGAGAC
GCACAGTGAATGTGATGCCGCATAGCAAAG
1390145
1390146
GCTCTTAAACTGATTGATCTGACATCTACCTGAGAC
TCTATTTCTGGAATTAACGTCATCGGTAGG
1390211
1390212
GCTCTTGAACTGATTGATCTGACATCTACCTGAGAC
CCTGGACGTTCGAATGCATAGAGCTGGTCGA
1390278
1390279
GCTCTTGAACTGATTGATCTGACATCTACCTGAGAC
CGTATTTTTCGGTCAAGTTCAGCCAACGTT
1390344
1390345
GCTCTTGAACTGATTGATCTGACATCTACCTGAGAC
GAACAGCAGAAGACATCACAATCAACACTG
1390410
1390411
GCTCTTGAACTGATTGATCTGACATCTACCTGAGAC
1390446
Left flanking sequence : Till position 1389288 (length
bp)
CTTTGAGATCAGTGTAAAATGCTGGCGAAAGGATTAGTTTCGCTTTTGACATTGCTGTTGCCTTCTTTTG
GGATTTGCATAGCATTTATGAGGTGAGTCT
Right flanking sequence : From position 1390446 (length
bp)
AGATCGTTTGGATCACCTTTAGTTAGTGGATACTGAATATTTGTAAGTGCCTTGTTTTCATGGGAACCGT
TCCGTTACTGTCGTATAATGAATGCAGAGG
Print the CRISPR sequence : From position
bp To position
bp