Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP014965_3                                                                                                                 top


Strain : Salmonella enterica subsp. enterica serovar Typhimurium str. CDC 2010K-1587 GCF_001623645 RefSeq :NZ_CP014965 (chromosome circular)
CRISPR id : NZ_CP014965_3
DR consensus (29 bp) : GTGTTCCCCGCGCCAGCGGGGATAAACCGNumber of repetitions :19
Begin Position : 1004756 End Position : 1005885

1004756GTGTTCCCCGCGCCAGCGGGGATAAACCGTGAGCAACGACAGTAAATAATTTTTCGTGCTG1004816
1004817GTGTTCCCCGCGCCAGCGGGGATAAACCGAACCGCTGGCGGGCTGATTGGTCTGCAACCAC1004877
1004878GTGTTCCCCGCGCCAGCGGGGATAAACCGCAACCAGGCTGGATCGTAACTCCTATCCCCTC1004938
1004939GTGTTCCCCGCGCCAGCGGGGATAAACCGAAAATGCAGGTGGGGTAACGAATGCGAGATTG1004999
1005000GTGTTCCCCGCGCCAGCGGGGATAAACCGCCAGTGGGCGTAGCCAGCTCATCGCTATTTTGC1005061
1005062GTGTTCCCCGCGCCAGCGGGGATAAACCGCGTTGCGGATTATCGTTAAGACTGAAGGAAGT1005122
1005123GTGTTCCCCGCGCCAGCGGGGATAAACCGCGTCACTACCGAGACCGAGACCGAGACCGAGA1005183
1005184GTGTTCCCCGCGCCAGCGGGGATAAACCGCCGCTGACGCACTGGATCAACCTGACGCAACG1005244
1005245GTGTTCCCCGCGCCAGCGGGGATAAACCGTTGCAGGGCGATATTGTTGTTGGTGAATGGGA1005305
1005306GTGTTCCCCGCGCCAGCGGGGATAAACCGCGTCGCGGAAAATTTCGCATTGACGATAAAGA1005366
1005367GTGTTCCCCGCGCCAGCGGGGATAAACCGTTACGTGTTTATTCATCTGTTGCATTAGATTC1005427
1005428GTGTTCCCCGCGCCAGCGGGGATAAACCTGAGGCGTACAGGCTGTTAGATGAGAAATTACC1005488
1005489GTGTTCCCCGCGCCAGCGGGGATAAACCGACGCCCCGAATGTGTTTGCCTCGCCCGCTGCC1005549
1005550GTGTTCCCCGCGCCAGCGGGGATAAACCGTGGATTATCTGTATTTTACGGAAGTGGGCGCG1005610
1005611GTGTTCCCCGCGCCAGCGGGGATAAACCGGTCGTTCATCAGGCACTACCGGCACTTTCTGG1005671
1005672GTGTTCCCCGCGCCAGCGGGGATAAACCGATATTCGCCGCTTTCCATTTACCGAACGTAAC1005732
1005733GTGTTCCCCGCGCCAGCGGGGATAAACCGCCACGTTCGGCGATGTTGGCCCCATCGGTCCA1005793
1005794GTGTTCCCCGCGCCAGCGGGGATAAACCGAAACGGTAGTGTTTTAAAACCGTTTCGAGGTGC1005855
1005856GTGTTCCCCGCGCCAGCGGGGATAAACCG1005884
Left flanking sequence : Till position 1004756 (length bp)
ATAAGTTGAATGTTCTTTAATAATAAGGAATTGTTATCTTACCGTTGGTAGTTTGTTATGTAGTAAAAAA
GGGCTTTTAGAACAAATATATAGTTTTAGT
Right flanking sequence : From position 1005885 (length bp)
ATAAGGCGCGGTGCCACCCTCGGCTTTAATTGTGTTCCCCGCGCCGACGCGTTCCAGCGCACGTTACTCG
ATCGTGTTCCCCGCGCCAGCGGGGATAAAC
Print the CRISPR sequence : From position bp To position bp