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CRISPRs details
NZ_CP014977_2
Flanking alignement tool
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NZ_CP014977_2                                                                                                                 
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Strain :
Salmonella enterica subsp. enterica serovar Typhimurium str. USDA-ARS-USMARC-1896 GCF_001623845
RefSeq :
NZ_CP014977 (chromosome circular)
CRISPR id :
NZ_CP014977_2
DR consensus (29 bp) :
GTGTTCCCCGCGCCAGCGGGGATAAACCG
Number of repetitions :
25
Begin Position :
989421
End Position :
990914
989421
GTGTTCCCCGCGCCAGCGGGGATAAACCG
TTTTGATACGTAGTATTCATTACGCCTCCTAG
989481
989482
GTGTTCCCCGCGCCAGCGGGGATAAACCG
GCGAGGTCAATAAAAAATGGTGTGGCTTTACC
989542
989543
GTGTTCCCCGCGCCAGCGGGGATAAACCG
CCGGCATCAGCGCCGATCCGTTCATAGTGCCC
989603
989604
GTGTTCCCCGCGCCAGCGGGGATAAACCG
AAAAAACAGAAGAACGGCAAGCGGCACCTCAA
989664
989665
GTGTTCCCCGCGCCAGCGGGGATAAACCG
CGTCAGCGCGGTATTGAGGCCGGGGACCGCCC
989725
989726
GTGTTCCCCGCGCCAGCGGGGATAAACCG
AACAGGAACAGGAAAAAAAAGATTTGTCCGGT
989786
989787
GTGTTCCCCGCGCCAGCGGGGATAAACCG
CAGATCCTCAACGGTCAGGCTGTTTAGTTCCT
989847
989848
GTGTTCCCCGCGCCAGCGGGGATAAACCG
CGGAGGATGGAATATTTCCGAGGCTGGCGATT
989908
989909
GTGTTCCCCGCGCTAGCGGGGATAAACCG
ATGCCGGAACGCTGATGGCGTTTGACATGAGC
989969
989970
GTGTTCCCCGCGCCAGCGGGGATAAACCG
AATTATTTCTGTGGCTGGGGTTTCGATTCGAT
990030
990031
GTGTTCCCCGCGCCAGCGGGGATAAACCG
TGACGCTGGTCTATACCGGCAACGAACGCGAC
990091
990092
GTGTTCCCCGCGCCAGCGGGGATAAACCG
TTGACGGTGACGTCAGTGCCGAAGGCGAAATA
990152
990153
GTGTTCCCCGCGCCAGCGGGGATAAACCG
CCAGCTTACGCTATTTACGACGTTATTGAGCA
990213
990214
GTGTTCCCCGCGCCAGCAGGGATAAATCG
AAACGAAAGAGGCTATGCGGTTGTTTATCGGT
990274
990275
GTGTTCCCCGCGCCAGCGGGGATAAACCG
CCCCGATAGCGACGCTTCTGTAGTCACTGGCA
990335
990336
GTGTTCCCCGCGCCAGCGGGGATAAACCG
GTGAGTTCGGTTTTAATTTCGTCGCTAAGCTGC
990397
990398
GTGTTCCCCGCGCCAGCGGGGATAAGCCG
CGTCACTTTCTGACATTTTATTCAGTTCGTTA
990458
990459
GTGTTCCCCGTGCCAGCGGGGATAAACCG
TCATTTCTGGACGGGGCTGTGTGACGAATACG
990519
990520
GTGTTCCCCGCGCCAGCGGGGATAAACCG
TGTCCAATTAACCCAAACTTTGCGCGCTTAAT
990580
990581
ATGTTCCCCGCGCTAGCGGGGATAAACCG
GGATATGTGAAGTTCAGGTAGCCCATTACGCA
990641
990642
GTGTTCCCCGCGCCAGCGGGGATAAACCG
TTGATCGAGAGTGCGAAGAGGCAGAACGGGCA
990702
990703
GTGTTCCCCGCGCCAGCGGGGATAAACCG
CAGGTTATGCGCAAAAATTAATTCATATTATA
990763
990764
GTGTTCCCCGCGCCAGCAGGGATAAACCG
GACGAGTTCTGGAAATGGTTAGCTGATAAAGA
990824
990825
GTGTTCCCCGCGCCAGCGGGGATAAACCG
CGTTCATCGGCAGCGTCACGCAATATGAAGAT
990885
990886
GTGTTCCCCGCGCCAACAAGGATAGCCGT
990914
Left flanking sequence : Till position 989421 (length
bp)
AGCAAATTAGCTGTTCTTTAATAATTTAAATTGTTGCGATTATGTTGGTAGAATGTGGTGCTGACAAAAA
GTAGTTTATAAACAATTATATCCGTTTAGT
Right flanking sequence : From position 990914 (length
bp)
TGCATAATCATAATCTGTGTACCAGTAATGGCAGCTACAAACCTGTAAAGTAAAAAGGCCGCGTTTTCCC
GGGGAGGCTTTTAGACAGGAGAAGGCCATG
Print the CRISPR sequence : From position
bp To position
bp