Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP016007_6                                                                                                                 top


Strain : Escherichia coli GCF_001660585 RefSeq :NZ_CP016007 (chromosome circular)
CRISPR id : NZ_CP016007_6
DR consensus (28 bp) : GTTCACTGCCGTACAGGCAGCTTAGAAANumber of repetitions :11
Begin Position : 4333324 End Position : 4333952

4333324GTTCACTGCCGTACAGGCAGCTTAGAAACGTGCGTATGCTGCCGCGCGATTCAGTACATC4333383
4333384GTTCACTGCCGTACAGGCAGCTTAGAAACGGCGCAGTGGTTTCCATTGGTGGGAAAAATG4333443
4333444GTTCACTGCCGTACAGGCAGCTTAGAAAGCATCACGTGTGGTGACTGAATACGCGGTCAA4333503
4333504GTTCACTGCCGTACAGGCAGCTTAGAAAAGAAGGGCGGGCGTCGTGTTGTTAAGCGCGAA4333563
4333564GTTCACTGCCGTACAGGCAGCTTAGAAACTGCTCGACCCTGTCATGCGGCGCATCCGGCTC4333624
4333625GTTCACTGCCGTACAGGCAGCTTAGAAAAGCGGTCGCCAAGGCAATGCTCGTACGCCGTC4333684
4333685GTTCACTGCCGTACAGGCAGCTTAGAAAACATCGACCGGGCCTGACCTCCTGCCTCCACC4333744
4333745GTTCACTGCCGTACAGGCAGCTTAGAAATGGATTACCGAGGCCCGAAAATATATTGGTGA4333804
4333805GTTCACTGCCGTACAGGCAGCTTAGAAAAAAAAGTTGCGTCGCGTGACCGGCACTATAGA4333864
4333865GTTCACTGCCGTACAGGCAGCTTAGAAACTGAACGTTGAAGAGTGCGACCGTCTCTCCTT4333924
4333925GTTCACTGCCGTACAGGCAGTATTCACA4333952
Left flanking sequence : Till position 4333324 (length bp)
GATAATTAGTGCTGCGGGTAGGTAAGGATAAAAAAGGGTGGCAGCAGGAGATTGAGATGGTTTTGCTTTA
TTAACAACGGGCTAAACGTGTAGTATTTGA
Right flanking sequence : From position 4333952 (length bp)
CTACGATAGTGTTAGACGTTTGGTCGTGCAATGACACTCTCAACTTCAAACCATTAGCGTTAGCACGCAA
TAACAATCGTAATAATTGCGATGGAAATCA
Print the CRISPR sequence : From position bp To position bp