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CRISPRs details
NZ_CP016408_4
Flanking alignement tool
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NZ_CP016408_4                                                                                                                 
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Strain :
Salmonella enterica subsp. enterica serovar Infantis GCF_001931575
RefSeq :
NZ_CP016408 (chromosome circular)
CRISPR id :
NZ_CP016408_4
DR consensus (29 bp) :
CGGTTTATCCCCGCTGGCGCGGGGAACAC
Number of repetitions :
27
Begin Position :
3496920
End Position :
3498536
3496920
ACGGCTATCCTTGTTGGCGCGGGGAACAC
TTGATGAAAGTTCATCTAATAATGATTGTGCT
3496980
3496981
GGGTTTATCCCCGCTGGCGCGGGGAACAC
GCGTATTCTCGCGGCGTTGGCTCCCGATGAGG
3497041
3497042
CGGTTTATCCCCGCTGGCGCGGGGAACAC
ACCACCCTGTCCGACAGTCTGGATAAATATCG
3497102
3497103
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TGGCACAAGTTCTTAAGTGCGATGTTGAATGG
3497163
3497164
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TTCGTCTTCATCAAAATCCAGCACCGGTTTTA
3497224
3497225
CGGTTTATCCCCGCTGGCGCGGGGAACAC
CCAGCGTGGCGGGATTTTGCCGAACAGGGCAT
3497285
3497286
CGGTTTATCCCCGCTGGCGCGGGGAACAC
CAGCGCCTGACGAGTGCTGAAAATGACCTCGT
3497346
3497347
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TTTTCACGTAGCGCACGATTCGGGGATATAGC
3497407
3497408
CGGTTTATCCCCGCTGGCGCGGGGAACAC
ACAAAATCCTTGCATTCCAGACGCTGAATTTCG
3497469
3497470
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TCCGTTGTGATAACTTCCCACATTGATGATCC
3497530
3497531
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TGCGTCCCGGTCTAAATATTCACCCTCGGCGT
3497591
3497592
CGGTTTATCCCCGCTGGCGCGGGGAACAC
CAAAAGCGAGGTTTCCAGCGAGCTAAAACCGG
3497652
3497653
CGGTTTATCCCCGCTGGCGCGGGGAACAC
AAGTGGCCCTTCGATCCAGTTTGATGAAAGTT
3497713
3497714
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TGCGTCTTTTTCCCGCTGGAGTTGAATATTCT
3497774
3497775
CGGTTTATCCCCGCTGGCGCGGGGAACAC
ATGTCGGCATTATCGGACGCGATCTCTGTTTC
3497835
3497836
CGGTTTATCCCCGCTGGCGCGGGGAACAC
GCCCGCCCACGGCGATCAGAATCAATCCACGC
3497896
3497897
CGGTTTATCCCCGCTGGCGCGGGGAACAC
CCAACCACCTCAACCTCCAGGCGGTCGATCTG
3497957
3497958
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TAAGGGCGTGCGCACTCAGCTCGTATTGGACG
3498018
3498019
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TGATGCTGGCCAACAGGAGCGCCCGCGGGAGC
3498079
3498080
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TTAATAACGTGGTCGATTTTGTTCAGGCGGGA
3498140
3498141
CGGTTTATCCCCGCTGGCGCGGGGAACAC
ATCAGCCCCTTCGGAAATAGCAATATTTCAGC
3498201
3498202
CGGTTTATCCCCGCTGGCGCGGGGAACAC
GCCAGCGGCGCAGGGTTCGCGTCAATGCTGGA
3498262
3498263
CGGTTTATCCCCGCTGGCGCGGGGAACAC
AGCTGGGAAGATTGGGCGCTTTCAATATCTTC
3498323
3498324
CGGTTTATCCCCGCTGGCGCGGGGAACAC
TCGCTAAGGGAGTCATTTTTCAGGAATGTGAT
3498384
3498385
CGGTTTATCCCCGCTGGCGCGGGGAACAC
GGTTTGCCGACGGGGGTTATCTGATATTTGAT
3498445
3498446
CGGTTTATCCCCGCTGGCGCGGGGAACAC
GCACGGACACTCCGGTAAAGCGCTGGTGTACGA
3498507
3498508
CGGTTTATCCCCGCTGGCGCGGGGAACAC
3498536
Left flanking sequence : Till position 3496920 (length
bp)
CATGGCCTTCTCCTGTATAAAAGCCTCCCCGGAAAAACGCGGCCTTTTTACTTTACAGGTTTGTAGCAGC
CATTACTGGTACACAGATTATGATTATGCA
Right flanking sequence : From position 3498536 (length
bp)
ACTAAACGTATATTGTTGTTTATAAACTGTTTTTTATCAGCACCACATTCCACCAACATAATCGCAACAA
TTTAAATTATTAAAGAACAGCTAATTTGCT
Print the CRISPR sequence : From position
bp To position
bp