Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP017621_5                                                                                                                 top


Strain : Salmonella enterica subsp. enterica serovar Typhimurium GCF_001887015 RefSeq :NZ_CP017621 (chromosome circular)
CRISPR id : NZ_CP017621_5
DR consensus (29 bp) : CGGTTTATCCCCGCTGGCGCGGGGAACACNumber of repetitions :6
Begin Position : 2981110 End Position : 2981443

2981110ACGGCTATCCTTGTTGGCGCGGGGAACACATCTTCATATTGCGTGACGCTGCCGATGAACG2981170
2981171CGGTTTATCCCCGCTGGCGCGGGGAACACCTGAAAACGCATGGAATCCGGTATAAACAGTC2981231
2981232CGGTTTATCCCCGCTGGCGCGGGGAACACGATGTAACTGATAGCGAAATATATTGGGATAA2981292
2981293CGGTTTATCCCCGCTGGCGCGGGGAACACGAAACGTAAACAGGGTAAGATACAACTCTGCA2981353
2981354CGGTTTATCCCCGCTGGCGCGGGGAACACTGTAAAGGGTGGTCTGGAAGGGGATCGGCAAA2981414
2981415CGGTTTATCCCCGCTGGCGCGGGGAACAC2981443
Left flanking sequence : Till position 2981110 (length bp)
CATGGCCTTCTCCTGTCTAAAAGCCTCCCCGGGAAAACGCGGCCTTTTTACTTTACAGGTTTGTAGCTGC
CATTACTGGTACACAGATTATGATTATGCA
Right flanking sequence : From position 2981443 (length bp)
ACTAAACGGATATAATTGTTTATAAACTACTTTTTGTCAGCACCACATTCTACCAACATAATCGCAACAA
TTTAAATTATTAAAGAACAGCTAATTTGCT
Print the CRISPR sequence : From position bp To position bp