Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP018206_3                                                                                                                 top


Strain : Escherichia coli GCF_001890365 RefSeq :NZ_CP018206 (chromosome circular)
CRISPR id : NZ_CP018206_3
DR consensus (29 bp) : CGGTTTATCCCCGCTGGCGCGGGGAACTCNumber of repetitions :18
Begin Position : 3707753 End Position : 3708818

3707753TGGTTTATTCCCGCTGGTGCGGGGAACTCATCAGTGATATCCAACATTGCGGAGCTAAACG3707813
3707814CGGTTTATCCCCGCTGGCGCGGGGAACTCACGAACGCGGCACACCAGGGCGTCTCATCGTC3707874
3707875CGGTTTATCCCCGCTGGCGCGGGGAACTCGGCACATGCCTGATCATATGTGTAGCAACGGT3707935
3707936CGGTTTATCCCCGCTGGCGCGGGGAACTCACGATGTATGACCGGAAAACCTCAGACTGGCG3707996
3707997CGGTTTATCCCCGCTGGCGCGGGGAACTCCCATTCTGGAATTTGTAATCTGGACTCCCATG3708057
3708058CGGTTTATCCCCGCTGGCGCGGGGAACTCATCCAGCGCATTCCTGTGTGCCGTATCTAAAT3708118
3708119CGGTTTATCCCCGCTGGCGCGGGGAACTCAGCACCATTTACCCACCATTGCTCAACGGTAC3708179
3708180CGGTTTATCCCCGCTGGCGCGGGGAACTTTGCCACTGGTTTCATGCAGGCCGCGCAAAAAT3708240
3708241CGGTTTATCCCCGCTGGCGCGGGGAACTCCAATTCATATACTGATAAATCATCAAAACAAA3708301
3708302CGGTTTATCCCCGCTGGCGCGGGAAACTCCCCCTGCGCTTGATGAACGACAACAAGAATGG3708362
3708363CGGTTTATCCCCGCTGGCGCGGGGAACTCGCAGTACCATTACATCAAAGAGTGCAGAATCC3708423
3708424CGGTTTATCCCCGCTGGCGCGGGGAACTCTTTAGCGGCCCCGCCTTTCAGCCCTGGTGCCG3708484
3708485CGGTTTATCCCCGCTGGCGCGGGGAACTCTCAATAATCTGATTACCGAACCCCAGCCCCAA3708545
3708546CGGTTTATCCCCGCTGGCGCGGGGAACTCAGAGCTAGGATTACTTTCGCTAATAAAGTATC3708606
3708607CGGTTTATCCCCGCTGGCGCGGGGAACTCACATAAATGAGCGCCATTTATGGCCCCGAAAA3708667
3708668CGGTTTATCCCCGCTGGCGCGGGGAACTCAAAACCGATATTTACCAGGTTGTTACTGATAG3708728
3708729CGGTTTATCCCCGCTGGCGCGGGGAACTCTGATGTTCAAGTGTGTATGCACACTCAGCAAA3708789
3708790CGGTTTATCCCCGCTGGCGCGGGGAACTC3708818
Left flanking sequence : Till position 3707753 (length bp)
TATGGAGAGCTATTTTGAACATGAGGTGTTACGTGGATATGTTGCTTAATACGAGTACTGCTAATATAAA
AACTTGAGAAAGAGATAACGGGTTATATGG
Right flanking sequence : From position 3708818 (length bp)
ACTAAACATAACCTATTATTAATTATTGATTTTTTAAGTCAGTCACAATCTACCAACTTAACAGAAACAC
ACAAACAACACATCCATTATGTTAAAGAGC
Print the CRISPR sequence : From position bp To position bp