Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NZ_CP019405_1                                                                                                                 top


Strain : Salmonella enterica subsp. enterica serovar Bergen str. ST350 GCF_001975325 RefSeq :NZ_CP019405 (chromosome circular)
CRISPR id : NZ_CP019405_1
DR consensus (29 bp) : GTGTTCCCCGCGCCAGCGGGGATAAACCGNumber of repetitions :11
Begin Position : 306986 End Position : 307626

306986GTGTTCCCCGCGCCAGCGGGGATAAACCGAGGCAAACGGCAGGTTGCGCGCCAGTTGAGCGC307047
307048GTGTTCCCCGCGCCAGCGGGGATAAACCGTTGCTTATTAATGAGTTTGCGGCGGTGTTAAT307108
307109GTGTTCCCCGCGCCAGCGGGGATAAACCGAGGCTTTGACAATGGCCTGGTTAAGTTGGAGT307169
307170GTGTTCCCCGCGCCAGCGGGGATAAACCGAGTACGAGGCACTATTCGGCAAGAAACCGCAC307230
307231GTGTTCCCCGCGCCAGCGGGGATAAACCGGCAAGCCACAGCGCAAAAGAGGTCTATTCCTG307291
307292GTGTTCCCCGCGCCAGCGGGGATAAACCGCAAACAGGGGGGGGCGACAGCGTACTGGGTAGG307353
307354GTGTTCCCCGCGCCAGCGGGGATAAACCGCGAGCGCGTAAGCTGCTGGCTGTGTCGGTCGC307414
307415GTGTTCCCCGCGCCAGCGGGGATAAACCGACGAAACCAAAATCGACGCCGCGACAGCACCT307475
307476GTGTTCCCCGCGCCAGCGGGGATAAACCGAGGTTTCGACGCCTCGTAACAACATCATATAG307536
307537GTGTTCCCCGCGCTAGCGGGGATAAACCGCACGAGTGGCAAATTGATTTCGACGAAAAACC307597
307598GTGTTCCCCGCGCCAACAAGGATAGCCGT307626
Left flanking sequence : Till position 306986 (length bp)
GCATTGTTTATTTTCTCTATGTGAATTTCGATGAGTGTATAAAAGCGCTGATAAATTTTTCCATAGCGAT
GCACGGATCGGTCATTATGTTAAATCGAAC
Right flanking sequence : From position 307626 (length bp)
TGCATAATCATAATCTGTGTACCAGTAATGGCTGCTACAAACCTGTAAAGTAAAAAGGCCGCGTTTTTCC
GGGGAGGCTTTTATACAGGAGAAGGCCATG
Print the CRISPR sequence : From position bp To position bp