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CRISPRs details
NZ_CP019870_13
Flanking alignement tool
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NZ_CP019870_13                                                                                                                 
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Strain :
Clostridioides difficile GCF_002007885
RefSeq :
NZ_CP019870 (chromosome circular)
CRISPR id :
NZ_CP019870_13
DR consensus (29 bp) :
ATTTACATTCCATATAGTTAATATAAAAC
Number of repetitions :
17
Begin Position :
2402960
End Position :
2404049
2402960
ACTTACATTCTGTATAGTTAATATAAAAC
ATAAGTAATATAAATTTATGTAAAGCAACAAAAGATGG
2403026
2403027
ATTTACATTCCATATAGTTAATATAAAAC
GATTTCAAATGATTAGAATAAAAATATCAGAATTGCT
2403092
2403093
ATTTATATTCCATATAGTTAATATAAAAC
TAAGAATGGAAAAGGAAATAGGAGTTCATATTCCAAC
2403158
2403159
ATTTACATTCCATATAGTTAATATAAAAC
TATGTATCCCCCATTAAAAAGGCTTAGATTAATTTCT
2403224
2403225
ATTTACATTCCATATAGTTAATATAAAAC
TCAAACATATCTAAGTTGTATTTCTCACCTTGTAGGTC
2403291
2403292
ATTTACATTCCATATAGTTAATATAAAAC
AAGGATTTTGAATGTAATTTATCATAAGGGTGGCAG
2403356
2403357
ATTTACATTCCATATAGTTAATATAAAAC
ATGAAAGATAATTGGAAAACTAAAGTGCAATCTAAAAA
2403423
2403424
ATTTACATTCCATATAGTTAATATAAAAC
GGAGAATTATTAAAAGGAGTTCCCGAAGCAGATAGAATA
2403491
2403492
ATTTACATTCCATATAGTTAATATAAAAC
CATTGTTATTATTGTGGTTCTCCCTTAGCTCATAATTT
2403558
2403559
ATTTACATTCCATATAGTTAATATAAAAC
ATGATATTATTATAATATTATAAATATAATAATGAGG
2403624
2403625
ATTTACATTCCATATAGTTAATATAAAAC
TAGATATTTAAAATAAGCGAAAGGGGGTCATAAAAAT
2403690
2403691
ATTTACATTCCATATAGTTAATATAAAAC
ATTCTAAAGATATTTTGCCTTGCAGTTGGGATTTCGA
2403756
2403757
ATTTACATTCCATATAGTTAATATAAAAC
CATCATAGGGGCTAATATAGTTAAAGGTGTTGGCGT
2403821
2403822
ATTTACATTCCATATAGTTAATATAAAAC
GGTTTGGTTACAAGGTATAGTAGAAGGATATAGTGGA
2403887
2403888
ATTTACATTCCATATAGTTAATATAAAAC
ATGGAACTAAGAGAGTACACCATCACATGATACTCAA
2403953
2403954
ATTTACATTCCATATAGTTAATATAAAAC
TAAAGCTGGAAAAGAAACAGCTATAATGAGTAATAATA
2404020
2404021
ATTTACATTCCATATAGTTAATATAAAAC
2404049
Left flanking sequence : Till position 2402960 (length
bp)
TACCTTTTGGTTTTTATAATATAGTGTAATTTTATTATATTTTTGTATGCTAATATAACTAGATAATCAT
AAGATAACACATTAAAAGAAAATTATAAAA
Right flanking sequence : From position 2404049 (length
bp)
CCCAAAATAAACTTAGTATTTTCAATACTTACACGTATACAACTCTCTTAAATTTGCAGTGAACGAGCAA
TAGTGCAATTGATAACGCTTATCATACACT
Print the CRISPR sequence : From position
bp To position
bp