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CRISPRs details
NZ_CP019870_9
Flanking alignement tool
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NZ_CP019870_9                                                                                                                 
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Strain :
Clostridioides difficile GCF_002007885
RefSeq :
NZ_CP019870 (chromosome circular)
CRISPR id :
NZ_CP019870_9
DR consensus (29 bp) :
GTTTTAGATTAACTATATGGAATGTAAAT
Number of repetitions :
17
Begin Position :
1500847
End Position :
1501926
1500847
GTTTTAGATTAACTATATGGAATGTAAAT
ATTACATGGGTAAAAATTTTGATGATTTTTATGACA
1500911
1500912
GTTTTAGATTAACTATATGGAATGTAAAT
TGTATAGAATTAAGAATTTTTTTAATACTAATTATA
1500976
1500977
GTTTTAGATTAACTATATGGAATGTAAAT
ATTACATTTAATTTGCATTGCTTTGATGACTTCTTT
1501041
1501042
GTTTTAGATTAACTATATGGAATGTAAAT
ATTTTTCAATATCAATATAGAACTTTCATCTTTCCC
1501106
1501107
GTTTTAGATTAACTATATGGAATGTAAAT
CAAGATATTTTTAATAAAATTTCTGAGCGAACTGTTT
1501172
1501173
GTTTTAGATTAACTATATGGAATGTAAAT
GAGGAGATTCAGACAGCGACTAAAAAGACTGATATAAA
1501239
1501240
GTTTTAGATTAACTATATGGAATGTAAAT
AACTTTATATCTCCATTTGCATATCCATCTGATGAAC
1501305
1501306
GTTTTAGATTAACTATATGGAATGTAAAT
GCGTACAAGGTTGAGAAGCTCCGCAATCTCAACGTCGT
1501372
1501373
GTTTTAGATTAACTATATGGAATGTAAAT
ATTTGAAAGGAATAAATTTTAAATGAATGAAAGGATAG
1501439
1501440
GTTTTAGATTAACTATATGGAATGTAAAT
CAGCCAAAAACTTCGAATTTGAACTAAAATGCGTGG
1501504
1501505
GTTTTAGATTAACTATATGGAATGTAAAT
TCTCATGACTATTGAATAAATATAATAAACAAGCATAC
1501571
1501572
GTTTTAGATTAACTATATGGAATGTAAAT
TTAGAATCAAAAGCACTTAATCCTAGTTCTTTCATA
1501636
1501637
GTTTTAGATTAACTATATGGAATGTAAAT
AGCTTTTTAGCTTCGTCTACTACTTTATAAGCAAAGC
1501702
1501703
GTTTTAGATTAACTATATGGAATGTAAAT
GATGAACAATAAAACAATCATCTAAAGACGAAGAAA
1501767
1501768
GTTTTAGATTAACTATATGGAATGTAAAT
GTTCCTGTTGTGTTTTTTACTAATCCCATTTTATAT
1501832
1501833
GTTTTAGATTAACTATATGGAATGTAAAT
TGCTGTGATTTCACTAATAAAACAATTAATAATTGT
1501897
1501898
GTTTTAGATTAATTATGTGGATTCAAAAT
1501926
Left flanking sequence : Till position 1500847 (length
bp)
GGTGCGTGATAAGTGTTATCAATTGCACTATTGCCCGCTCACTGCAATTTTAAGAGTATTGTATATATGT
AGGTATTGGAAATGCTAAGTTTATTTTGGG
Right flanking sequence : From position 1501926 (length
bp)
TAAATAAACAAAGAAAGCACTTACAAATATGTAGGTGCTTTTATTCTGTTCAAAATTGGTCGGTTGGGTA
AAATAATTAGAAAAAATTAGTAAAAACCTC
Print the CRISPR sequence : From position
bp To position
bp