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CRISPRs details
NZ_LT549890_12
Flanking alignement tool
Page manual
  
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NZ_LT549890_12                                                                                                                 
top
Strain :
Sulfolobus solfataricus P1 GCF_900079115
RefSeq :
NZ_LT549890 (chromosome linear)
CRISPR id :
NZ_LT549890_12
DR consensus (24 bp) :
CTTTCAATTCTATAGTAGATTAGC
Number of repetitions :
66
Begin Position :
1884786
End Position :
1889015
1884786
CTTTCAATTCTATAGTAGATTAGC
ATATTTAAAGTTTTTGCTCAACCAGTTAGGTAACAAGTATTCT
1884852
1884853
CTTTCAATTCTATAGTAGATTAGC
AAAGCGGTTGTTTTCCAGTTCCAGAAACTGGAATTCTTAT
1884916
1884917
CTTTCAATTCTATAGTAGATTAGC
GGATTTTTAAATGGAGTGAATTGATAAAATGATAAAGC
1884978
1884979
CTTTCAATTCTATAGTAGATTAGC
TTGGTGGGGCGATGAACGGCAACGATATGTTGGACGTCAT
1885042
1885043
CTTTCAATTCTATAGTAGATTAGC
CTGGAAAACAAATTGAAGAAAGTAAAAAAATTGAAATTTTAA
1885108
1885109
CTTTCAATTCTATAGTAGATTAGC
GATAGAGAAAAGTTTATAAAGGAGAGTGAAGATATGTATAT
1885173
1885174
CTTTCAATTCTATAGTAGATTAGC
TCTAACACTTTATGATTTCAAGAACTTTGCAAGAAATAA
1885236
1885237
CTTTCAATTCTATAGTAGATTAGC
TTAGCATGCGAAACAAATGAAGAATTCAGAAGAGAGTTAG
1885300
1885301
CTTTCAATTCTATAGTAGATTAGC
AAAGAATGAGGAAAGAGGCATTGGAAGGCATTGAAGAAGGTA
1885366
1885367
CTTTCAATTCTATAGTAGATTAGC
TGGAGATTTAATTAGATATCATCACTTCGTTCCTTTCTCTC
1885431
1885432
CTTTCAATTCTATAGTAGATTAGC
CTGTTACGCCGGTGCTGGAGGGTAAGTTAGTTGGAGAGCT
1885495
1885496
CTTTCAATTCTATAGTAGATTAGC
TTTCCCAGACTTAGTAAAGGACATTTGGAAGGTTCTAAT
1885558
1885559
CTTTCAATTCTATAGTAGATTAGC
ATGAAACAGAAAAAGTTAACATTTTAGACCACCAATTAAA
1885622
1885623
CTTTCAATTCTATAGTAGATTAGC
AAGACCCCGACTTTTTAAGGTTTACAGATCCCGCAGAAAA
1885686
1885687
CTTTCAATTCTATAGTAGATTAGC
ATGAGGTTCGTCGTGTAGGGATTAATCCCGTGTCTAAAG
1885749
1885750
CTTTCAATTCTATAGTAGATTAGC
TAATTATCAATGGCAAACCGCATATAATTGGATGAGATTA
1885813
1885814
CTTTCAATTCTATAGTAGATTAGC
TTTACTACACATGTAATAAGTATGTTGATTATGGAATAGAAT
1885879
1885880
CTTTCAATTCTATAGTAGATTAGC
TTGAACACGTGATATAGAACCAGTTGTTCTAATACGTT
1885941
1885942
CTTTCAATTCTATAGTAGATTAGC
AACAATAGCAATAGCTTTGCTTATAGTCGGTGTAATAAT
1886004
1886005
CTTTCAATTCTATAGTAGATTAGC
TTGTAAAGACTAGGTAAAACTTTGTTATCATAATAGCAGTA
1886069
1886070
CTTTCAATTCTATAGTAGATTAGC
AGGAGGGGCTATACGTACGATCACGAATGTAACATTATCGTGA
1886136
1886137
CTTTCAATTCTATAGTAGATTAGC
AGTATCTGGCTTTTCGACACAAAACTTCCTTTACCAAC
1886198
1886199
CTTTCAATTCTATAGTAGATTAGC
ACGACGATGCTATGTGTTGCACTGTATTTGATCACGGTTAT
1886263
1886264
CTTTCAATTCTATAGTAGATTAGC
TACGGTTAAAAGTTGGCAAAAAGCTTAAATTTTTGCAT
1886325
1886326
CTTTCAATTCTATAGTAGATTAGC
CTTATGAGCCTCTTTGAGATGTGTCTCTGACTTCTGA
1886386
1886387
CTTTCAATTCTATAGTAGATTAGC
ATAAATAAACTAGGTTTGTATTTATCACCTCCAACAATTCA
1886451
1886452
CTTTCAATTCTATAGTAGATTAGC
AAACGATAAATTAGCACTATATTATAACTATGATTCTACACA
1886517
1886518
CTTTCAATTCTATAGTAGATTAGC
AACTGTAACTGGTAGCCTTGGTCAGGTGTTACTGACAGTGTCGATG
1886587
1886588
CTTTCAATTCTATAGTAGATTAGC
CAAAATGATATACATATAGTACCATCACCTAGCGCAAGAC
1886651
1886652
CTTTCAATTCTATAGTAGATTAGC
GGATATCCAGCAATTGCAACAGGTGGGTCGGGGATATCATTGC
1886718
1886719
CTTTCAATTCTATAGTAGATTAGC
TTTAACTATGACTTTTCAGAATACAACAATTTCGCCAATT
1886782
1886783
CTTTCAATTCTATAGTAGATTAGC
ATGTATACAATAGATCATATGTTATATATAGAGAATGTACCAAT
1886850
1886851
CTTTCAATTCTATAGTAGATTAGC
TCTTGTACAAACTCTCATACACGTTCATTGCAAAACAGTTCAT
1886917
1886918
CTTTCAATTCTATAGTAGATTAGC
TACACTGTTGCTTTCCTAACGCTCTACATCGCGTTGT
1886978
1886979
CTTTCAATTCTATAGTAGATTAGC
TGCAGGAGGGCGAGGAAGAATGATAAAGATGGAGGAAAA
1887041
1887042
CTTTCAATTCTATAGTAGATTAGC
TTGTCCCTTCCATGGGCATTTGTCACTTTCACAAAACCTA
1887105
1887106
CTTTCAATTCTATAGTAGATTAGC
ATAAAAAAAGAATTATAACTTATTCATCATTCTTTTAATA
1887169
1887170
CTTTCAATTCTATAGTAGATTAGC
TTATAATCCCCGTGACACAGAAAGAATTTTAAATATCATAAT
1887235
1887236
CTTTCAATTCTATAGTAGATTAGC
TAAACTAACAAGTAAAATTATAACTCCTAACGGAATTGC
1887298
1887299
CTTTCAATTCTATAGTAGATTAGC
TGACGATTATAACACTGAACATGAGTATGCAGTAAGTGAAGT
1887364
1887365
CTTTCAATTCTATAGTAGATTAGC
AGAATAATCAGTGATGAACAGTGTGAGAAACTTGTCCAAGTTTT
1887432
1887433
CTTTCAATTCTATAGTAGATTAGC
ATGATGTTGAAAATGGACTAAAACTTTTAGATGAAAAACT
1887496
1887497
CTTTCAATTCTATAGTAGATTAGC
TGAACGGAACATCTATTTTTACTCCTAACATCATTCAATCA
1887561
1887562
CTTTCAATTCTATAGTAGATTAGC
AAATAATGATAAATAAGGATGAGGTGATAGTACAATGAAATT
1887627
1887628
CTTTCAATTCTATAGTAGATTAGC
AGCCCTCCAAAATCGTAAAACCTTGAATATATGAAGTTAAATTTA
1887696
1887697
CTTTCAATTCTATAGTAGATTAGC
GTGCTGTAGGCTGTAGGACTGTCGAGGTAGCGTTTGAAG
1887759
1887760
CTTTCAATTCTATAGTAGATTAGC
AGAGTTAATAAACATTTCGAATCCCCACGCTAACGAAAAG
1887823
1887824
CTTTCAATTCTATAGTAGATTAGC
ACAAATAACGAAACGAATAAATATAATAAATTATGAATA
1887886
1887887
CTTTCAATTCTATAGTAGATTAGC
TTGGTGAACCGGTGATAATATTCGTTACGGCGTCCAATACTGT
1887953
1887954
CTTTCAATTCTATAGTAGATTAGC
CCTTACCCTTCAGGAAGCTGCAGAAGATGGTGGAGTACA
1888016
1888017
CTTTCAATTCTATAGTAGATTAGC
CATCCGTTACGCTGAGCATACTAAGATCTGTCCTATTTGCCATA
1888084
1888085
CTTTCAATTCTATAGTAGATTAGC
TATGGGGGTCAGTGACACTTATTCCACCGTTCAGTATTT
1888147
1888148
CTTTCAATTCTATAGTAGATTAGC
TGGAATTTTGAATTTTTTGCACCGCTCCAATTATTATTTGG
1888212
1888213
CTTTCAATTCTATAGTAGATTAGC
TTGTCTGTCGGTGAAGCAGTAGTATTTCTAAGAGGCCGTCC
1888277
1888278
CTTTCAATTCTATAGTAGATTAGC
TCTACTTCTGTCTTCTTAGCCATTCAGCTCACCTTTG
1888338
1888339
CTTTCAATTCTATAGTAGATTAGC
GTAAGAATAATTTTACAAAATCTTAGTAATTATATAGTTTATAT
1888406
1888407
CTTTCAATTCTATAGTAGATTAGC
CCTCGCTTTAACCGAGGTGTCTCGGTGACGCTTGCTCCGT
1888470
1888471
CTTTCAATTCTATAGTAGATTAGC
AGATTGGTGTATAGTAACAGAAAAGCAGACAACGAAAGGA
1888534
1888535
CTTTCAATTCTATAGTAGATTAGC
ATGTTAGTTATCGGCGTTATAATGGGTATCGGAATCGGTGTAG
1888601
1888602
CTTTCAATTCTATAGTAGATTAGC
CTATTTTTGTCAATAATTTTTTTATTTTTGCATTTTTCGAAAT
1888668
1888669
CTTTCAATTCTATAGTAGATTAGC
GTAATCTTATTTCTGCGGTAAATTGAGATTATAGATGGTAC
1888733
1888734
CTTTCAATTCTATAGTAGATTAGC
ATCATTTATGCACATTTCAACTCCATTTCCAATATGAAT
1888796
1888797
CTTTCAATTCTATAGTAGATTAGC
CCACGTTTTTTGTCTTAACTTTAATTGATTTATTAGAAT
1888859
1888860
CTTTCAATTCTATAGTAGATTAGC
AAGGTCAATCCATTCTGGGGGCGTTAAACCCGCATCCCTGT
1888924
1888925
CTTTCAATTCTATAGTAGATTAGC
GGCAGTGTTAGAATACTAACGGGCGAAGAAGAATGGGTTTATT
1888991
1888992
CTTTCAATTCTATAGTAGATTAGC
1889015
Left flanking sequence : Till position 1884786 (length
bp)
GTAAGCCCCTTGCTACAACTCTATAGAAGTGCGGGTTTTAAACAGCTGTTTGAGAATATAAACATGGGGT
AAAAAAGCTACAACTCTATAGAAGTGCGGG
Right flanking sequence : From position 1889015 (length
bp)
AAGAAGAGAAGGAGGGTATCATAGTGAGGGTAGCCAACTTGTTGGCTGTGGGCTTCCTCTATAGCGAGTC
TCCAACACTAGTGGATAGGTTTGCTAATGC
Print the CRISPR sequence : From position
bp To position
bp