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CRISPRs details
NC_000916_7
Flanking alignement tool
Page manual
  
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NC_000916_7                                                                                                                 
top
Strain :
Methanothermobacter thermautotrophicus str. Delta H
RefSeq :
NC_000916 (chromosome circular)
CRISPR id :
NC_000916_7
DR consensus (30 bp) :
ATTTCAATCCCATTTTGGTCTGATTTTAAC
Number of repetitions :
124
Begin Position :
983373
End Position :
991584
983373
ATTTCAATCCCATTTTGGTCTGATTTTAAC
TATCTTATGTCCGTTATTTTTTACCTACGTTGCAG
983437
983438
ATTTCAATCCCATTTTGGTCTGATTTTAAC
CAACAATAAAATTCAGGGGGACTGAGTACATAAAAG
983503
983504
ATTTCAATCCCATTTTGGTCTGATTTTAAC
GATTGAAATTACTGAGGATGGTCTCTACTTCCACCTT
983570
983571
ATTTCAATCCCATTTTGGTCTGATTTTAAC
ACGGCGTCTGTGACGTCGTTAGAGAGGATGGAGTCGT
983637
983638
ATTTCAATCCCATTTTGGTCTGATTTTAAC
GGTTTTGTGTGGGTGTGCATTCTGGTTGTGGTTGGTC
983704
983705
ATTTCAATCCCATTTTGGTCTGATTTTAAC
AAGCGCCGGGCAGACAGCACACATACAAGACTTCACAA
983772
983773
ATTTCAATCCCATTTTGGTCTGATTTTAAC
TTTCACGATGACTCTGTTGAGTTCATCGTATTCTTTCC
983840
983841
ATTTCAATCCCATTTTGGTCTGATTTTAAC
TGATGTTGGGAAGGTTTGGCCATCTGAATGATTTGA
983906
983907
ATTTCAATCCCATTTTGGTCTGATTTTAAC
TCAACATGGGGACATACGTCCAGGGGGACAGACGC
983971
983972
ATTTCAATCCCATTTTGGTCTGATTTTAAC
TCACCCTCCAGACTAGCTCATCAATGTACCCATTACC
984038
984039
ATTTCAATCCCATTTTGGTCTGATTTTAAC
GAAATACAACCCCACACGCCAGTCCATCCTCTTTC
984103
984104
ATTTCAATCCCATTTTGGTCTGATTTTAAC
CTGTCTGCCCCTATTGTTTTGATCATGTTTGTGCATG
984170
984171
ATTTCAATCCCATTTTGGTCTGATTTTAAC
CCTTTAGAACTAAAAAAATAACAAAATAAAAAAAGAC
984237
984238
ATTTCAATCCCATTTTGGTCTGATTTTAAC
GGGTTCTCATAGATGGGCGACAGAAAGACATGAAAA
984303
984304
ATTTCAATCCCATTTTGGTCTGATTTTAAC
CCGTTACTCATGCATTATTAGTGAGAAACAACTCTTT
984370
984371
ATTTCAATCCCATTTTGGTCTGATTTTAAC
GATTGAAATTACTGAGGATGGTCTCTACTTCCACCTT
984437
984438
ATTTCAATCCCATTTTGGTCTGATTTTAAC
GGTCGGTGCCCGGGTCGGGTCGGTGCCCGGGTCGGGT
984504
984505
ATTTCAATCCCATTTTGGTCTGATTTTAAC
TATCATCACGCTTGAAGAGTATAATAAAGTTGTTAAGA
984572
984573
ATTTCAATCCCATTTTGGTCTGATTTTAAC
TGTTCACTATTTGGGTCATTTATGGGTACTATTTTG
984638
984639
ATTTCAATCCCATTTTGGTCTGATTTTAAC
TATGAGGGCTGTGCATGCACGGATCAGCAAGGAAACAA
984706
984707
ATTTCAATCCCATTTTGGTCTGATTTTAAC
TCAGATTCTTTCTGACAATAATATGAGGTGATATAAA
984773
984774
ATTTCAATCCCATTTTGGTCTGATTTTAAC
AGTATGTGCAGTATCCTCTCTATGTCCCCTTCATTC
984839
984840
ATTTCAATCCCATTTTGGTCTGATTTTAAC
CCTATATTATGTCCATTATTTTTCATTTACGCTGCAG
984906
984907
ATTTCAATCCCATTTTGGTCTGATTTTAAC
AATATTGAAACGTTCAAGGACATGTTGAAGAGGTATG
984973
984974
ATTTCAATCCCATTTTGGTCTGATTTTAAC
GAGGAAACGTTTACCCTTGAAGGGCGTAAGGCCTGATA
985041
985042
ATTTCAATCCCATTTTGGTCTGATTTTAAC
TTTCGGTGGGGGGTAGGTGGGGGGTGTGAAGGTAGAT
985108
985109
ATTTCAATCCCATTTTGGTCTGATTTTAAC
GTATCCATGACTCCTGATGCCCTGGCACGTCGAAGTCA
985176
985177
ATTTCAATCCCATTTTGGTCTGATTTTAAC
AGTATGTGCAGTATCCTCTCTATGTCCCCTTCATTC
985242
985243
ATTTCAATCCCATTTTGGTCTGATTTTAAC
GGTTTAGGGACTGTGAGATCGTTGTTGAACATAATAA
985309
985310
ATTTCAATCCCATTTTGGTCTGATTTTAAC
TCGGTGGGGGTAGGTGGGGGTATAATCAGAACAAAT
985375
985376
ATTTCAATCCCATTTTGGTCTGATTTTAAC
GGTTTAGGGACTGTGAGATCGTTGTTGAACATAATAA
985442
985443
ATTTCAATCCCATTTTGGTCTGATTTTAAC
TCGGTGGGGGTAGGTGGGGGTATAATCAGAACAAAT
985508
985509
ATTTCAATCCCATTTTGGTCTGATTTTAAC
AATATAGTGCAAATGATTCTAGAAAATAGTAAAATA
985574
985575
ATTTCAATCCCATTTTGGTCTGATTTTAAC
TAAAATGAAAAAAAGATTCAAAAAAACATGCAAATG
985640
985641
ATTTCAATCCCATTTTGGTCTGATTTTAAC
ACAAAGTGCCCCGCATGTCGTGAAAAGATGAAGAAA
985706
985707
ATTTCAATCCCATTTTGGTCTGATTTTAAC
CGTGGAGGGCCTCGACTACTACAAGGCTATCAGGTT
985772
985773
ATTTCAATCCCATTTTGGTCTGATTTTAAC
TGAATCTGACATGAACTGCTATTGCTGTAACCGATAT
985839
985840
ATTTCAATCCCATTTTGGTCTGATTTTAAC
GCTAAAAAGGAGTACCTGCAACGGAAAGTACCGGT
985904
985905
ATTTCAATCCCATTTTGGTCTGATTTTAAC
CTTTTAAATCCTCTAAAAACTGTTCTAAACACCAATC
985971
985972
ATTTCAATCCCATTTTGGTCTGATTTTAAC
AACTTCACAGAAAAGCCTCCATGGAGCAAGTGCTCT
986037
986038
ATTTCAATCCCATTTTGGTCTGATTTTAAC
AAGAGGTGAAAGATATGAAAATAAAAGTAAAAATAGA
986104
986105
ATTTCAATCCCATTTTGGTCTGATTTTAAC
CTCCTCACTACCACTAAGATCATATGCTGCCGCATAA
986171
986172
ATTTCAATCCCATTTTGGTCTGATTTTAAC
AGGAGAAACTGGATAGGAGGTGAATGAGATGATTGA
986237
986238
ATTTCAATCCCATTTTGGTCTGATTTTAAC
ATGTTTTTGAGGTCGTATAGCACTATGATCGCACAA
986303
986304
ATTTCAATCCCATTTTGGTCTGATTTTAAC
GATTTTGACGGTGAGTACAATCTCTGCTGTCAGAACTG
986371
986372
ATTTCAATCCCATTTTGGTCTGATTTTAAC
AGGTTTATGGGTTCTAAACAATAGAACCCCTGATTA
986437
986438
ATTTCAATCCCATTTTGGTCTGATTTTAAC
ATAGAATGAAGAGGAAATACAAGAAAACATGCAAATG
986504
986505
ATTTCAATCCCATTTTGGTCTGATTTTAAC
GGGTTAATAAAATCGTCGATGATGTTGTAGACAAAATCA
986573
986574
ATTTCAATCCCATTTTGGTCTGATTTTAAC
ATGGATGAGGAAGGTGACGGCCCTGGGAAGTACAGGG
986640
986641
ATTTCAATCCCATTTTGGTCTGATTTTAAC
ACATACCCTTCTTCATATAAGAACTGCACATAGTCAAT
986708
986709
ATTTCAATCCCATTTTGGTCTGATTTTAAC
CGAGAAGGGTGAGGACGTCCTTGAGGGCGCATACGATGTCCT
986780
986781
ATTTCAATCCCATTTTGGTCTGATTTTAAC
GCTTAGTCGTTATAATCGAGTCGATAAGATTCTTTGA
986847
986848
ATTTCAATCCCATTTTGGTCTGATTTTAAC
CCGTGCTGAGGATGTCTTCGTGTACCCGGTCCTTCT
986913
986914
ATTTCAATCCCATTTTGGTCTGATTTTAAC
CTGTAGCGAATTACTCCGCTGAGTTCTCATCCTTTGAT
986981
986982
ATTTCAATCCCATTTTGGTCTGATTTTAAC
CCATTTTGTTGCCTCATTTAAACTCATCTTTAAAATT
987048
987049
ATTTCAATCCCATTTTGGTCTGATTTTAAC
GCAGAGGAAAACGAAGAAAAGGAGAAAATAGAAGCCA
987115
987116
ATTTCAATCCCATTTTGGTCTGATTTTAAC
CTATCTAAGTAGTATGAGTCTTCAAAGAGGATATTGA
987182
987183
ATTTCAATCCCATTTTGGTCTGATTTTAAC
CAGGCTTAGTGTGGGTTTTATTGAATCTGTACTTAT
987248
987249
ATTTCAATCCCATTTTGGTCTGATTTTAAC
CCGTGCTGAGGATGTCTTCGTGTACCCGGTCCTTCT
987314
987315
ATTTCAATCCCATTTTGGTCTGATTTTAAC
CTGTAGCGAATTACTCCGCTGAGTTCTCATCCTTTGAT
987382
987383
ATTTCAATCCCATTTTGGTCTGATTTTAAC
CCATTTTGTTGCCTCATTTAAACTCATCTTTAAAATT
987449
987450
ATTTCAATCCCATTTTGGTCTGATTTTAAC
GCAGAGGAAAACGAAGAAAAGGAGAAAATAGAAGCCA
987516
987517
ATTTCAATCCCATTTTGGTCTGATTTTAAC
CTATCTAAGTAGTATGAGTCTTCAAAGAGGATATTGA
987583
987584
ATTTCAATCCCATTTTGGTCTGATTTTAAC
CAGGCTTAGTGTGGGTTTTATTGAATCTGTACTTAT
987649
987650
ATTTCAATCCCATTTTGGTCTGATTTTAAC
AGGTGAGAAAAAATGAAAGGAAAAGAAGTTGAGAAA
987715
987716
ATTTCAATCCCATTTTGGTCTGATTTTAAC
TGGCTTGGCCAGGCTGGGGTCCAGGCCACCCTCATCGC
987783
987784
ATTTCAATCCCATTTTGGTCTGATTTTAAC
ACTTATTTATCGATAAAGTTCTACTCACATGTTTAGT
987850
987851
ATTTCAATCCCATTTTGGTCTGATTTTAAC
GGGGAGGACCTCATAAAATTTTTGGATTAAAATGTG
987916
987917
ATTTCAATCCCATTTTGGTCTGATTTTAAC
TTTCCCTGAGATGATGTCCTTGATTGTGCTGC
987978
987979
ATTTCAATCCCATTTTGGTCTGATTTTAAC
ATATACATCATATATTAATAAAATAAAAAAAATCAATA
988046
988047
ATTTCAATCCCATTTTGGTCTGATTTTAAC
GAGTTCATTGTACTCATTGATCGTCTCTTCATCCCC
988112
988113
ATTTCAATCCCATTTTGGTCTGATTTTAAC
TGGATTATTGGGACTTACATGCGACAGATTTTTATA
988178
988179
ATTTCAATCCCATTTTGGTCTGATTTTAAC
GGATCTGAAAATAAAGAAAGCTTCAAATCAAAAAATA
988245
988246
ATTTCAATCCCATTTTGGTCTGATTTTAAC
CTTCTAGCAAGAGACATTGACGATATACACAAGTAC
988311
988312
ATTTCAATCCCATTTTGGTCTGATTTTAAC
CGGGGAGAGTCTGACATTCTTGAAGTAGAACCTCCCC
988378
988379
ATTTCAATCCCATTTTGGTCTGATTTTAAC
TCACACTGTACCCGAACTTCTCCGCGACTTTCTTTA
988444
988445
ATTTCAATCCCATTTTGGTCTGATTTTAAC
AGAGGTTATGAAATCAGTAATAGCCTCAAGGAGTAAG
988511
988512
ATTTCAATCCCATTTTGGTCTGATTTTAAC
TAAAAGTAACCTATAACAATTACCTATGGCTCATAA
988577
988578
ATTTCAATCCCATTTTGGTCTGATTTTAAC
CCTCAGTAATGTAATAATCGATATAGCAAGTTGCGATG
988645
988646
ATTTCAATCCCATTTTGGTCTGATTTTAAC
ACGTAACAGTATATACTGTCCAAAATGTGCCGCAGAA
988712
988713
ATTTCAATCCCATTTTGGTCTGATTTTAAC
CTATAGGGTCATCCTCGAGGACAGCGCCCGCTTG
988776
988777
ATTTCAATCCCATTTTGGTCTGATTTTAAC
GGCTCGGCCAGGCAGGGGTGGAAATGGAACTCGTCG
988842
988843
ATTTCAATCCCATTTTGGTCTGATTTTAAC
TATGACGCCCTCAAAGTCTTTTTCCCGTGCGGCCTCG
988909
988910
ATTTCAATCCCATTTTGGTCTGATTTTAAC
CATGTCATGACCCGTGCCATGATCCGCCGATCAAAA
988975
988976
ATTTCAATCCCATTTTGGTCTGATTTTAAC
TCGAATGCCTATTAAGCCTGTATTCAGCATTAGAAGA
989042
989043
ATTTCAATCCCATTTTGGTCTGATTTTAAC
AGGCCTGGTTCATGGTCGAGGGTCTCCTTGCTTAT
989107
989108
ATTTCAATCCCATTTTGGTCTGATTTTAAC
TGTTCACTATTTGGGTCATTTATGGGTACTATTTTG
989173
989174
ATTTCAATCCCATTTTGGTCTGATTTTAAC
TATGAGGGCTGTGCATGCACGGATCAGCAAGGAAACAA
989241
989242
ATTTCAATCCCATTTTGGTCTGATTTTAAC
TCAGATTCTTTCTGACAATAATATGAGGTGATATAAA
989308
989309
ATTTCAATCCCATTTTGGTCTGATTTTAAC
CATATAACGAAATTAAGTCAAATTCGTTTCATTAGT
989374
989375
ATTTCAATCCCATTTTGGTCTGATTTTAAC
TCAGGTTGAGGTTTCAGGTTGAGGTTTCAGGTTG
989438
989439
ATTTCAATCCCATTTTGGTCTGATTTTAAC
GGATGATCGGGGTGGGTATGTTCATGCATGGAAATC
989504
989505
ATTTCAATCCCATTTTGGTCTGATTTTAAC
TGAATACCTGTTCCTCTTCGTATTCCTCATCGCAAC
989570
989571
ATTTCAATCCCATTTTGGTCTGATTTTAAC
CCTTTTTACTCTGTTTAGCCCTTTTTACTGCACAAT
989636
989637
ATTTCAATCCCATTTTGGTCTGATTTTAAC
TTACTTTTATAAATAATATCTGAACTTTTTCACCTT
989702
989703
ATTTCAATCCCATTTTGGTCTGATTTTAAC
AAGGCGGTTAAGCACACTCAACGCTCTGATTGAGTGT
989769
989770
ATTTCAATCCCATTTTGGTCTGATTTTAAC
TCACAGTCAGCTCCACTGAGTCCATGCTTAGAGCCTC
989836
989837
ATTTCAATCCCATTTTGGTCTGATTTTAAC
TTAATTCCAATATGGGCCGATATCTGCCCTCTTTT
989901
989902
ATTTCAATCCCATTTTGGTCTGATTTTAAC
CCGGAACACCAGGTCCTGGGCTTGTGGGTTCTGCTCG
989968
989969
ATTTCAATCCCATTTTGGTCTGATTTTAAC
CATCTGTTTCACCTCTTCTTTTTTTCTTTGTG
990030
990031
ATTTCAATCCCATTTTGGTCTGATTTTAAC
TTTATTAATTTAGTATTGGTTGTTTGGTTAATTC
990094
990095
ATTTCAATCCCATTTTGGTCTGATTTTAAC
ATATATACCATATTGAACATTGATTTTAGCGTTTTT
990160
990161
ATTTCAATCCCATTTTGGTCTGATTTTAAC
CCAGCAGAAACAGTAATAGTCAAATATTATAAGCACA
990227
990228
ATTTCAATCCCATTTTGGTCTGATTTTAAC
CTTGATAAGGGTAGTAAACGAACCCGATAGTGAATAT
990294
990295
ATTTCAATCCCATTTTGGTCTGATTTTAAC
CCAAATAAAACGTTAATATCGATTTAATTCCAATA
990359
990360
ATTTCAATCCCATTTTGGTCTGATTTTAAC
CGTTTCAACTAATGAAACTGTCTTAAATTGCTTATTT
990426
990427
ATTTCAATCCCATTTTGGTCTGATTTTAAC
TCGCAGAACATCATACACATCAGGTAGTCTATACAGT
990493
990494
ATTTCAATCCCATTTTGGTCTGATTTTAAC
TGATGGTTTTGATGTTTTGTGTAAAATTCGTGAG
990557
990558
ATTTCAATCCCATTTTGGTCTGATTTTAAC
GAAGTCACACTGAATACGAAGAAATACAAGACACAGT
990624
990625
ATTTCAATCCCATTTTGGTCTGATTTTAAC
CCGGTCCTTGACGGGAAAATCTACAGGGCCACAATAG
990691
990692
ATTTCAATCCCATTTTGGTCTGATTTTAAC
ACACAGTACAATTATTCGGAATAATACACGCACAATG
990758
990759
ATTTCAATCCCATTTTGGTCTGATTTTAAC
ATGAACATGCAGATAAAAGATGATATAATAGAAAAAT
990825
990826
ATTTCAATCCCATTTTGGTCTGATTTTAAC
AAGTATTTTTCTGAATTCACGGATTGCTTCGC
990887
990888
ATTTCAATCCCATTTTGGTCTGATTTTAAC
TATAATCGAATATTGTTGCGTATTGTGTTGTGTTTTT
990954
990955
ATTTCAATCCCATTTTGGTCTGATTTTAAC
AGGTTCTTGTGGGTTATTGTTGTCCTAGTCCAGTTTACAC
991024
991025
ATTTCAATCCCATTTTGGTCTGATTTTAAC
CTAAAGTTTCTCTGTAGTCCACATCCCCTTTTTTCA
991090
991091
ATTTCAATCCCATTTTGGTCTGATTTTAAC
TGAGGTGACAAGTATCAGGTTCTCACAGTGTTTCATG
991157
991158
ATTTCAATCCCATTTTGGTCTGATTTTAAC
ACCGATGGTACCTCAGGATACTATTCCCACCACTCACC
991225
991226
ATTTCAATCCCATTTTGGTCTGATTTTAAC
TTGAAGACTCATACTACTTAGACAGTTTTGAATTCG
991291
991292
ATTTCAATCCCATTTTGGTCTGATTTTAAC
ATCGAGGAATTCTATTTTATCCTCACCAGGATAGCGG
991358
991359
ATTTCAATCCCATTTTGGTCTGATTTTAAC
ATGTTTTCCGTTATACTATAGTGCGTTTTGGTATTG
991424
991425
ATTTCAATCCCATTTTGGTCTGATTTTAAC
CCATACCACACATTTGGATTGTAGGTGGTTGATGTTA
991491
991492
ATTTCAATCCCATTTTGGTCTGATTTTAAC
TAGCGGTTAATGTCGTCGATGTCCCTTGTTATT
991554
991555
ATTTCAATCCCATTTTGGTCTGATTTTAAC
991584
Left flanking sequence : Till position 983373 (length
bp)
GGCCGGCTGTAATGAAATGTTAATCATAAAATAAAATCCGGATCAAACAACTGGTTCTATAGTTCGTTAT
AGCTTTATATAACGAAATAAACGCATTCAA
Right flanking sequence : From position 991584 (length
bp)
AGGGCGGATTTTTTCTTCATTTGACCTCTATCGCTTTGAAATTTCTCCTTTCAGACATATAAATTTGTCG
ATCCCAGAAAATGCATTCTATTTATATGGA
Print the CRISPR sequence : From position
bp To position
bp