Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_000917_2                                                                                                                 top


Strain : Archaeoglobus fulgidus DSM 4304 RefSeq :NC_000917 (chromosome circular)
CRISPR id : NC_000917_2
DR consensus (30 bp) : CTTTCAATCCCATTTTGGTCTGATTTCAACNumber of repetitions :48
Begin Position : 398369 End Position : 401590

398369CTTTCAATCCCATTTTGGTCTGATTTCAACTTACTGTGTTCCGAGCTTTCAGAGGCAGGCCAAGAGCT 398436
398437CTTTTAATCCCATTTTGGTCTGATTTCAACCTTCATGTGCTCTCAACCAGTAGTATATTGTCCTAACTG 398505
398506CTTTCAATCCCATTTTGGTCTGATTTCAACAGGCCCGGAATCAACAGGAACACCTGATACACGAATA 398572
398573CTTTCAATCCCATTTTGGTCTGATTTCAACATGCGGAATTAACAGCATTATCAGGAAAGCGATTATGA 398640
398641CTTTCAATCCCATTTTGGTCTGATTTCAACGGGGGGAGGATGAGAGCTCTGTTTGCCGTTCTGGTGT 398707
398708CTTTCAATCCCATTTTGGTCTGATTTCAACTTTCTGGCATGGGGAGTTAGCAGGAACGTGGCAGGCTA 398775
398776CTTTCAATCCCATTTTGGTCTGATTTCAACGTTAAGCTCTCGGTCGGGCTCTTTGCTCGGTAGAACC 398842
398843CTTTCAATCCCATTTTGGTCTGATTTCAACGACTGTAATCTCAACTCCTCCGCCATCTTCTGAAACTC 398910
398911CTTTCAATCCCATTTTGGTCTGATTTCAACCACATTGACGTGGCGGATTAAGCGCTTGTGGAAAGTGTTTT 398981
398982CTTTCAATCCCATTTTGGTCTGATTTCAACGATGAAGCCATATTTGTCGCATTATTCCACGACGTC 399047
399048CTTTCAATCCCATTTTGGTCTGATTTCAACCTTCTCAACTATCGGTTGTTTGACATTTGTATCCTTTC 399115
399116CTTTCAATCCCATTTTGGTCTGATTTCAACGAAGTTCCACATTCCCGTGACTTTCAAGAAGATTATG 399182
399183CTTTCAATCCCATTTTGGTCTGATTTCAACACAATCTGATCGAACAGATTACCAGTCAAAGCAACTCC 399250
399251CTTTCAATCCCATTTTGGTCTGATTTCAACTTGCTGAGCTCAGAGGCTTTACCGCTAACACTCGCCTTAACG 399322
399323CTTTCAATCCCATTTTGGTCTGATTTCAACTTGTCAGTTCTCTTCTGATCGATTCGGCCAGAGTGGTATATT 399394
399395CTTTCAATCCCATTTTGGTCTGATTTCAACCTGAGTCTGCTTACTCCAAGATTTATGTCTCTGTATGTCT 399464
399465CTTTCAATCCCATTTTGGTCTGATTTCAACCCGGCAAAACAAGATACCACGATTTCTTCCCATGCCA 399531
399532CTTTCAATCCCATTTTGGTCTGATTTCAACCTCCGACTATCACCCAGTCAAACCCCTCGAAGTCCGA 399598
399599CTTTCAATCCCATTTTGGTCTGATTTCAACAGGTGCCTTGTAACCTTTCTATTTTTTGATTGCTCT 399664
399665CTTTCAATCCCATTTTGGTCTGATTTCAACTACCGAGCTGCTCAGCGTTGGGATGGAGTATTTCACG 399731
399732CTTTCAATCCCATTTTGGTCTGATTTCAACCTGCGGGGGAGCAGCCCATCGCCGAATACGACAAC 399796
399797CTTTCAATCCCATTTTGGTCTGATTTCAACTACTCCCCTGAAACCTCCTCAGAGCCTTCGTGTCCT 399862
399863CTTTCAATCCCATTTTGGTCTGATTTCAACCGTTCGGCGTCGTAGAGGAAGAGAAGAGGGAGTCCAGA 399930
399931CTTTCAATCCCATTTTGGTCTGATTTCAACGAGGCGTTCATCAAGGAGGCTTACCGAGTTCTAAAAAAAGA 400001
400002CTTTCAATCCCATTTTGGTCTGATTTCAACAGTCGTTTTGAAAACCACCGAGCCGTCAGCGGTTGCGACCC 400072
400073CTTTCAATCCCATTTTGGTCTGATTTCAACTAAGATCCTGAAGCCAGATCCAGACCTCAAAGAAGGC 400139
400140CTTTCAATCCCATTTTGGTCTGATTTCAACCAATCTCGTCGTCAGCAATCGAGATATTAGCAGTTCCCGA 400209
400210CTTTCAATCCCATTTTGGTCTGATTTCAACTATTTAGCCCTCTTAACGACCCGTTCTTCGCTGTTTAT 400277
400278CTTTCAATCCCATTTTGGTCTGATTTCAACTTTAAGAACCTTGAATGTCTTACCTGCTGGAAGTCTAAACC 400348
400349CTTTCAATCCCATTTTGGTCTGATTTCAACTCAGCCACGTCGTTGAACCGATGCTCGCAGACTTCAACGGCTCC 400422
400423CTTTCAATCCCATTTTGGTCTGATTTCAACTCCGTAACTATGCTATTGTTCTCAAGCAAATTATACT 400489
400490CTTTCAATCCCATTTTGGTCTGATTTCAACCAGGAGGAATGATATGTTTATTGGACAAAGACAGGT 400555
400556CTTTCAATCCCATTTTGGTCTGATTTCAACATCGCCAATTGCCTCAACACTCACTTTGCCATAGCAATACAA 400627
400628CTTTCAATCCCATTTTGGTCTGATTTCAACTTCGGGGGATTTGATGAGTTGCTTCTCCTCTTGCCCTT 400695
400696CTTTCAATCCCATTTTGGTCTGATTTCAACTCCCCTCTGGAGTTCGTGAGGTATGCCTCCTTTAT 400760
400761CTTTCAATCCCATTTTGGTCTGATTTCAACGGCCGAGCTGAAGCTGCTCTATGTCGGAGAGTTCCA 400826
400827CTTTCAATCCCATTTTGGTCTGATTTCAACTAACGAATCTCAAAGCCCTCGCATTGGAAAGGGTCG 400892
400893CTTTCAATCCCATTTTGGTCTGATTTCAACCAAGTACAGACTCTCGAAGCCGCCCGTAAAATCGCT 400958
400959CTTTCAATCCCATTTTGGTCTGATTTCAACAAACCCCCCTCTTGGTGGAGTTGGCAAAGATTATGTC 401025
401026CTTTCAATCCCATTTTGGTCTGATTTCAACTCACGACGCTCCCTAACGGTAAGGCAATAGTTAAAAG 401092
401093CTTTCAATCCCATTTTGGTCTGATTTCAACTAGGGCAACAGTTGTTCGATCTCCTCTCTCGTTAAG 401158
401159CTTTCAATCCCATTTTGGTCTGATTTCAACTGTTCAATCAAGTCAAAACGTATTACTCTCAAAGCG 401224
401225CTTTCAATCCCATTTTGGTCTGATTTCAACCATTAACAGCTCTCAGAACGATTTGGGACAGAACAAT 401291
401292CTTTCAATCCCATTTTGGTCTGATTTCAACTTGAACTCCACCTCTGGCAACAGCGGCTGCTATTACTG 401359
401360CTTTCAATCCCATTTTGGTCTGATTTCAACCCTTGATCGAGGGAGAGAAGAACCCTCGAGTCGTCGTC 401427
401428CTTTCAATCCCATTTTGGTCTGATTTCAACTCAAAAACGTTTTGGAGAGTAGTTCTCGCACTTGCTG 401494
401495CTTTCAATCCCATTTTGGTCTGATTTCAACCGCCTTGCTGAAAGCTCTAAGCACCACTTCGGCAAT 401560
401561CTTTCAATCCCATTTTGGTCTGATTTCAAC401590
Left flanking sequence : Till position 398369 (length bp)
CTCCCCCCGCATTTAGTTCTGTTCGTTGAGTTTGGGAGGTTCAAGAAGCATGTCCAAGTAAAAGATATCT
CTGATGACGAAAAGAAGATTTACACGTCCA
Right flanking sequence : From position 401590 (length bp)
CATCAGTAATTTTCCCTCTATTTCCAATTTAAAGTTTTCTGAGGGATTTTTTCATTTATATACCTCCGCG
AGGTGTCGAAAGTGCATCTCATTTATAACG
Print the CRISPR sequence : From position bp To position bp