CRISPR details
Home
About CRISPRs
News
FAQs
Help
Contact Us
Examples
IGM
Navigation
Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison
Other Tools
CRISPRcompar
CRISPRtionary
CRISPRfinder
GPMS Links
GPMS Team
Tandem Repeats DB
MLVA Web Service
CRISPRs details
NC_001880_1
Flanking alignement tool
Page manual
  
Home Page
NC_001880_1                                                                                                                 
top
Strain :
Aquifex aeolicus VF5
RefSeq :
NC_001880 (plasmid ece1 )
CRISPR id :
NC_001880_1
DR consensus (29 bp) :
CTTTCTATCCCATATATGGGAACTAAAAC
Number of repetitions :
4
Begin Position :
437
End Position :
663
437
CTTTCTATCCCATATATGGGAACTAAAAC
CTCAATAGCTTCTACTCCTTCAGGCACAGCTTCTTT
501
502
CTTTCTATCCCATATATGGGAACTAAAAC
CAAAGAAGTCCTTTATCTTAGAAACCTTCTTTTTGGAC
568
569
CTTTCTATCCCATATATGGGAACTAAAAC
GGGAGTTCTAAAGAAGAGGTAATCGGGTATCTTTTCG
634
635
CTTTCTATCCCATATATGGGAACTAAAAC
663
Left flanking sequence : Till position 437 (length
bp)
CATGATTATGACCCTTGAGCTTTGTGCTAACGCTTTAAAGGTTTTGAGTAGGTAATCAAGCTCGTCAATT
ATCTGCTTGTATTTAAGCCTTGTCAATAAG
Right flanking sequence : From position 663 (length
bp)
CCGTTAATACCCTATTGGCTTTCAAGTAATATCTTAACAAACTTTTCAAATTGATAAGCCTCCCTTTTAG
CACCCGCGTTCACCTGCACCGGAGAGCCAG
Print the CRISPR sequence : From position
bp To position
bp