Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_002950_1                                                                                                                 top


Strain : Porphyromonas gingivalis W83 RefSeq :NC_002950 (chromosome circular)
CRISPR id : NC_002950_1
DR consensus (36 bp) : GTTGGATCTACCCTCTATTCGAAGGGTACACACAACNumber of repetitions :8
Begin Position : 375957 End Position : 376454

375957GTTGGATCTACCCTCTATTCGAAGGGTACACACAACTTCTTGTCGAAGTAAAACATCTTGCCTCCA 376022
376023GTTGGATCTACCCTCTATTCGAAGGGTACACACAACCATAGACGTAAGGCATACCCGTTTCGATCT 376088
376089GTTGGATCTACCCTCTATTCGAAGGGTACACACAACATAAGACTATATCTTATATAACCAAATTCT 376154
376155GTTGGATCTACCCTCTATTCGAAGGGTACACACAACTCAAGGGTCGGGTTCTTGACCTTACCTCCA 376220
376221GTTGGATCTACCCTCTATTCGAAGGGTACACACAACTATAAAGGTTTGTTCAAGGAATGTGCTACC 376286
376287GTTGGATCTACCCTCTATTCGAAGGGTACACACAACGATGCGGACAACGTCCCTGTACTCCGTCTT 376352
376353GTTGGATCTACCCTCTATTCGAAGGGTACACACAACAGTCGATTAGCTCGTCCGCCGACACGTCTT 376418
376419GTTGGATCTACCCTCTATTCGAAGGGTACACACAAC376454
Left flanking sequence : Till position 375957 (length bp)
GACTGTTTTTCGCCGGCTTGCAGTGGCTCCAAAGCCTTACCGTCACTCACTTTCTGTGGAATGATGACTT
CTCAATCGGTTTCAAATTCGATGGGGGTAG
Right flanking sequence : From position 376454 (length bp)
ATGATTCTTGATTGGTGGCTTGGGCGTTGGAATGTGCAGTAGTGTGGGGATTCTTCCTCGTTGGGGCTTT
TTCGCTAAATTTGCAGGCGGACGAGGTGCT
Print the CRISPR sequence : From position bp To position bp