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CRISPRs details
NC_003364_1
Flanking alignement tool
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NC_003364_1                                                                                                                 
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Strain :
Pyrobaculum aerophilum str. IM2
RefSeq :
NC_003364 (chromosome circular)
CRISPR id :
NC_003364_1
DR consensus (25 bp) :
GTTTCAACTATCTTTTGATTTCTGG
Number of repetitions :
15
Begin Position :
39812
End Position :
40776
39812
TGTTTCAACTTCTTTTGATTTCTGG
TGGAAGAACTGCAGCGGATATACGGCCCAGTCGTTAATGAGGC
39879
39880
GTTTCAACTATCTTTTGATTTTTGG
CTCATTAATAAAATTGATGATACTTTCAGCCATAAGAGAAA
39945
39946
GTTTCAACTATCTTTTGATTTCTGG
ACATGCGTATGGCGGTAGGCGACGTGTAGAATATAGTGAAAATGG
40015
40016
GTTTCAACTATCTTTTGATTTCTGG
GGGGTAAGTGGTTTGACAAGGAGCAAGCAGTAGAACTGCT
40080
40081
GTTTCAACTATCTTTTGATTTCTGG
GGTCGGCCCAATTACTGAACAAATAGTCTGTATGGTTTAA
40145
40146
GTTTCAACTATCTTTTGATTTCTGG
GTAATTAAATATTAATTACGACTTGTGCACACACATGGAGAGA
40213
40214
GTTTCAACTATCTTTTGATTTCTGG
GGCGTTGGCAACGCTGGACAGTACGGTGGCGGTGTTGTCA
40278
40279
GTTTCAACTATCTTTTGATTTCTGG
ACACGGCATTTCCAACACCGAGGGTGTGGGAGTGGATAGCCGT
40346
40347
GTTTCAACTATCTTTTGATTTCTGG
ATATTTGGAAAAATCGATAAGGAAAGACTATTGGAACTTG
40411
40412
GTTTCAACTATCTTTTGATTTCTGG
AAGGTCTCAGACCGTCATTTGATGCTTTGGTTAGTTTTGAAGCC
40480
40481
GTTTCAACTATCTTTTGATTTCTGG
CAGGAGGGTTGTGGGGTGCACATGACGTACACGTCTGTGATGCT
40549
40550
GTTTCAACTATCTTTTGATTTCTGG
TGGAGAATTGGCTTCTTAGCTGTTTCTACGCAGCGCCTTTCTGG
40618
40619
GTTTCAACTATCTTTTGATTTCTGG
ACCACTGCTAGAACAATGGAAAAATGGTGGCAAGTTAA
40681
40682
GTTTCAACTATCTTTTGATTTCTGG
GCAAGCGGAAAGGGACACGGTATACGCCGGCTGTACCGAGGTCAT
40751
40752
GTTTCAACTATCTTTTGATTTCTGG
40776
Left flanking sequence : Till position 39812 (length
bp)
CGAAAAACTAGCCACTATTCTCCGCGGCAGGGAGAGAATTGTAGAACTGGCTGAGGAGTTGGCAAACGCC
AAGGTCGAGCTGGAGACGTGTAAAAGGGAT
Right flanking sequence : From position 40776 (length
bp)
GGCTTGCGTGTATAGTTCCTGTGGGTTTTTAAGTTTTTCTTTGATTTTTTGCTGTACGGCTAGCTCCTTT
TCACACTCGCTTTACATTCATATATACCGC
Print the CRISPR sequence : From position
bp To position
bp