Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_005126_2                                                                                                                 top


Strain : Photorhabdus luminescens subsp. laumondii TTO1 RefSeq :NC_005126 (chromosome circular)
CRISPR id : NC_005126_2
DR consensus (28 bp) : GTGCACTGCCGTACAGGCAGCTTAGAAANumber of repetitions :25
Begin Position : 2126977 End Position : 2128442

2126977GTGCACTGCCGTACAGGCAGCTTAGAAAACAAGTAACTATTTTCGTTACCGTAACCTTCT 2127036
2127037GTGCACTGCCGTACAGGCAGCTTAGAAAATCAAGTAGTGCTTACAAAGGAGAAGAATGTA 2127096
2127097GTGCACTGCCGTACAGGCAGCTTAGAAACGCATACCAAGCATCGAATCCCCGTTTAGATA 2127156
2127157GTGCACTGCCGTACAGGCAGCTTAGAAATAAACGATAACCCCATGCTTCTAATGATTGAG 2127216
2127217GTGCACTGCCGTACAGGCAGCTTAGAAATTTCCGCTGTACGTTGTACTGCACTATTTAAT 2127276
2127277GTGCACTGCCGTACAGGCAGCTTAGAAAATCAAAGCACAGCAACGAACAGGCAAGGAAAG 2127336
2127337CCGCACTGCCGTACAGGCAGCTTAGAAATGATACGTCCACAGGTAGCTATTTTCGTTACC 2127396
2127397GTGCACTGCCGTACAGGCAGCTTAGAAAAAGGGAGTGGACCAAAGGGTAAACCTCAGTTA 2127456
2127457GTGCACTGCCGTACAGGCAGCTTAGAAAAATCAAACTCCAGTCAGTATCGCTATCCGTAC 2127516
2127517GTGCACTGCCGTACAGGCAGCTTAGAAAGTAAACAAACGAAGTATCGGTCTGCCGCTCTT 2127576
2127577GTGCACTGCCGTACAGGCAGCTTAGAAAAGACGTGCTCCTTGGGTCCTCTCATTAAGTGT 2127636
2127637GTGCACTGCCGTACAGGCAGCTTAGAAATGCATCCATCAACATTAAGCCCGTTGACGATT 2127696
2127697GTGCACTGCCGTACAGGCAGCTTAGAAAGGTAGCGCCCGATCCCTGATTCAGCTTTAA 2127754
2127755GTGCACTGCCGTACAGGCAGCTTAGAAATTACATAGGCGGCGAGTTCTGCACTGATAGAA 2127814
2127815GTGCACTGCCGTACAGGCAGCTTAGAAAGAGATGAATGACATTGCGCTTCAATGGCAAAC 2127874
2127875GTGCACTGCCGTACAGGCAGCTTAGAAATAACACATCAGCAAGCTGTTGCTGTGGCAAGT 2127934
2127935GTGCACTGCCGTACAGGCAGCTTAGAAAACACGTCAGTTCGATAATAAAATCCAGGTCAT 2127994
2127995GTGCACTGCCGTACAGGCAGCTTAGAAAAAAATGAGAGTAAGACGATTAGATAGCGATCA 2128054
2128055GTGCACTGCCGTACAGGCAGCTTAGAAATTTCTCTGTATCAATAACCGCTGTTGTGCCGC 2128114
2128115GTGCACTGCCGTACAGGCAGCTTAGAAAAATGAAATTAATCGTTTCTCTTACAATATTTC 2128174
2128175GTGCACTGCCGTACAGGCAGCTTAGAAATACTATGTTGGGATATGCTGCATTATCTAGAA 2128234
2128235GTGCACTGCCGTACAGGCAGCTTAGAAATCTTGGCCCACATGCGCCACAACGTGGGATGG 2128294
2128295GTGCACTGCCGTACAGGCAGCTTAGAAAAGTATGCACCTTGCGGAAAGCGACAAAGTGGT 2128354
2128355GTGCACTGCCGTACAGGCAGCTTAGAAAAAATCCCCGGTCGCTATCAGTAATTGCATCAG 2128414
2128415GTGCACTGCCGTACAGGCAGCTTAGAAG2128442
Left flanking sequence : Till position 2126977 (length bp)
TAATTTAAAAGAAAAATAAAACATCTCCTGAAAAAAGGGTTTTTTAATTTTTTATCACTATATTCTTTAA
CAGTCAGCAACTTAAGGTTAATATGTAACA
Right flanking sequence : From position 2128442 (length bp)
CGCGATAACTGCCTTAGGTTGTTAGGTATAATATTGGAGGTTAATTGCGCAGTCTTGGGGCCAGTAGTTG
ATGGCGGATGGATTCTGCTAGCTCATCGAG
Print the CRISPR sequence : From position bp To position bp