Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation


Other Tools


GPMS Links





NC_005213_2                                                                                                                 top


Strain : Nanoarchaeum equitans Kin4-M RefSeq :NC_005213 (chromosome circular)
CRISPR id : NC_005213_2
DR consensus (28 bp) : CTTTCAATATTTCTAATATATTAGAAACNumber of repetitions :29
Begin Position : 488569 End Position : 490537

488569ATTTCTAATATACTAATATTCTAGAAACAGTATTTTTGTGTCTCGTCCAGGAATAACCATGTTTCAT 488635
488636CTTTCAATATTTCTAATATATTAGAAACACTACAGTGTAATTTGGTCAGCAGGCGTCGGTTGGCTATAA 488704
488705CTTTCAATATTTCTAATATATTAGAAACTAGCGACAATATCTTCTTCTCTCGTGTATCTCGGGAAT 488770
488771CTTTCAATATTTCTAATATATTAGAAACTATAGACCGCCATTGCGTATATGCTTAATTCCTTATCCGC 488838
488839CTTTCAATATTTCTAATATATTAGAAACGAGAAACAATTAAGCTATTATCAATAACATTCACAGCAAC 488906
488907CTTTCAATATTTCTAATATATTAGAAACTGGAGGACAACGAAAGGTTTTTAAAGGAACAGGGCGAGAATGTGGA 488980
488981CTTTCAATATTTCTAATATATTAGAAACGTGGTTGGGAGGGAGCCGAAGGGTCCGAAGGGTTCGAAT 489047
489048CTTTCAATATTTCTAATATATTAGAAACATGTTGTGTTCTATTGCCACGGATGTATCTGCTATTATGT 489115
489116CTTTCAATATTTCTAATATATTAGAAACTTGATAAATTCTTTGAAGTTATATGTAATTATCACTCTAT 489183
489184CTTTCAATATTTCTAATATATTAGAAACATTTTCAAAGACTCTAAAAATCTGGGGGAAATGAAATTGG 489251
489252CTTTCAATATTTCTAATATATTAGAAACTATATGAATTGTCTAGGTACTTTTGTGTCTCATCCAAAAATAACCATGTTTCGTTCGAATTTCTGT 489345
489346CTTTCAATATTTCTAATATATTAGAAACCACATTTATGTATATTATATAATACTTTAAAAGTCTAACAG 489414
489415CTTTCAATATTTCTAATATATTAGAAACGATCACATACAGGAATTGCTGAAGAAATTGTTACAGGAAAAG 489484
489485CTTTCAATATTTCTAATATATTAGAAACATGATAAGATGTTTGCTCAAAAAGCCAAATGCTTTTACACA 489553
489554CTTTCAATATTTCTAATATATTAGAAACCATCATATTTAAAGAGTTTGAGAACACGATACATTT 489617
489618CTTTCAATATTTCTAATATATTAGAAACGTGGGTCAATTTAAAGGATATTTCACAAATGTAGAGTTAGAAA 489688
489689CTTTCAATATTTCTAATATATTAGAAACATCCTATCAATTCTGGAATCTGATGCTGGATCAAATATAA 489756
489757CTTTCAATATTTCTAATATATTAGAAACTTCAGGACAAGAACAATGTAAAATAACTCAATTTAACATA 489824
489825CTTTCAATATTTCTAATATATTAGAAACTCATTCTTAGATAAACAAGATATAGTATTTAGAAAGATG 489891
489892CTTTCAATATTTCTAATATATTAGAAACATGGCGGAACATTACAATTGAAGATAGATAATAAGAGTAA 489959
489960CTTTCAATATTTCTAATATATTAGAAACATCATTTCTTGTTGTCTCTGAAGCCAAAGAATCTGTAGAG 490027
490028CTTTCAATATTTCTAATATATTAGAAACCAGTCTTAACTATAATGCATGTTATTTGCCTAACTGATAA 490095
490096CTTTCAATATTTCTAATATATTAGAAACATTGCAGTTTATACTGAAGATCCTTCTTAATTCTAGTTA 490162
490163CTTTCAATATTTCTAATATATTAGAAACACAGCTAAACATTTATAAATAATTATATTATTATTATCCATA 490232
490233CTTTCAATATTTCTAATATATTAGAAACTTACATTATCCCTAATTACTATTCTTACTATCGAATTGTA 490300
490301CTTTCAATATTTCTAATATATTAGAAACTGTTACAAATGTGTATACTACCAATATCAATGCAAATCAA 490368
490369CTTTCAATATTTCTAATATATTAGAAACTGTTAATGATTATATGCTGAGTTGTTAATAATGTTGTCCT 490436
490437CTTTCAATATTTCTAATATATTAGAAACTTAATCCCGTTCAAAGTAGCACTTGAATCCAATAGTGAACTCTTT 490509
490510CTTTCAATATTTCTAATATATTAGAAAC490537
Left flanking sequence : Till position 488569 (length bp)
ACTCAATAATCTCCAATATATTTTTAAATCTTTATGCCTTATCAAAAAGTTTTTTATAAATATATTATCA
TATAATATTTTATGATAACCCACTTCCAAC
Right flanking sequence : From position 490537 (length bp)
CCACAGGGCTATTCGAGCCTTTTCCCTTATATTTACAATTACGAACCTTATTATTTAAAAACCTTCTGCG
AGGTTTTATAGTAAAAATATTTAAAAACCC

Print the CRISPR sequence : From position bp To position bp