CRISPR details
Home
About CRISPRs
News
FAQs
Help
Contact Us
Examples
IGM
Navigation
Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison
Other Tools
CRISPRcompar
CRISPRtionary
CRISPRfinder
GPMS Links
GPMS Team
Tandem Repeats DB
MLVA Web Service
CRISPRs details
NC_005838_6
Flanking alignement tool
Page manual
  
Home Page
NC_005838_6                                                                                                                 
top
Strain :
Thermus thermophilus HB27
RefSeq :
NC_005838 (plasmid pTT27 )
CRISPR id :
NC_005838_6
DR consensus (36 bp) :
GTTGCAAGGGATTGAACCCCGTAAGGGGATTGCGAC
Number of repetitions :
7
Begin Position :
153106
End Position :
153599
153106
GTTGCAAGGGATTGAACCCCGTAAGGGGATTGCGAC
GGCCCCTGACGAGGTTCCTAGGTGAGGTCGGTCTCCTTCTGG
153183
153184
GTTGCAAGGGATTGAACCCCGTAAGGGGATTGCGAC
CCCCCGTGTGGGAGGTGGACCTGGGGGGCCTCGAGAT
153256
153257
GTTGCAAGGGATTGAACCCCGTAAGGGGATTGCGAC
GCTCCGGGTGGGCCCCGTCCTCCTCGGGCCCGAGAGGAGA
153332
153333
GTTGCAAGGGATTGAACCCCGTAAGGGGATTGCGAC
TGATGCTGATCATTGCTCACCTCCTGCCCGGAGGTGG
153405
153406
GTTGCAAGGGATTGAGCCCCGTAAGGGGATTGCGAC
AAATGCGGTCCTGGAGTGGGAATACAACGAAGTTTCCGTTCA
153483
153484
GTTGCAAGGGATTGAGCCCCGTAAGGGGATTGCGAC
ACGGTACCGGCGAAGGACTTGGCCACACCTTGAATGACCGTCAT
153563
153564
GTTGCAAGGGATTGAGCCCCGTAAGGGGATTGATAC
153599
Left flanking sequence : Till position 153106 (length
bp)
AAACCCCCATTATTCGCCGTGTGCATATTCCAAGCTTCATCTTTCTCACAAACCCCCCCTCTGGTGGTGC
CGTCCGGGACGGGGTTCTTAGGGGGGTACC
Right flanking sequence : From position 153599 (length
bp)
TGTCTTGCCTGTCAAGCGACCCCTTGATCTAGCTGGGTTGCGTAGTACTCCCTGAGCCTGCCCACCATCC
GCCTGAGGAGCTTGTGGGCCACGGCTAAAA
Print the CRISPR sequence : From position
bp To position
bp