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CRISPRs details
NC_006392_2
Flanking alignement tool
Page manual
  
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NC_006392_2                                                                                                                 
top
Strain :
Haloarcula marismortui ATCC 43049
RefSeq :
NC_006392 (plasmid pNG400 )
CRISPR id :
NC_006392_2
DR consensus (30 bp) :
GTTTCAGACGGACCCTTGGGCGGTTGAAGT
Number of repetitions :
26
Begin Position :
35013
End Position :
36696
35013
GTTTCAGACGGACCCTTGGGCGGTTGAAGT
CTGTTCGGTGTCTTCGTGGGCGCGTGCGTCGGGATCG
35079
35080
GTTTCAGACGGACCCTTGGGCGGTTGAAGT
AAATCCTTCGCCGCACTCTTTGCATAGATGCACTC
35144
35145
GTTTCAGACGGACCCTTGGGCGGTTGAAGT
GAGGGAGACGCCGACGACCAGGAGGCTATCCTGCC
35209
35210
GTTTCAGACGGACCCTTGGGCGGTTGAAGT
CGAGCTCTTGCATGGTCAGAACAGAAAGTCGCGAACG
35276
35277
GTTTCAGACGGACCCTTGGGCGGTTGAAGT
GACCCCCGCACTTTCGCAAGGGGCCGCTTAGTGTAAG
35343
35344
GTTTCAGACGGACCCTTGGGCGGTTGAAGT
TCAGACAGGAGTACCTCGCCGAGTTCCTCGACGACACGG
35412
35413
GTTTCAGACGGACCCTTGGGCGGTTGAAGT
CGCGGGTCTGGCTCGATGGCGACGACATCGACATCAT
35479
35480
GTTTCAGACGGACCCTTGGGCGGTTGAAGT
AGTCGGAATGTGCGTCTTGCTCCCGTCGTCGTTGATG
35546
35547
GTTTCAGACGGACCCTTGGGCGGTTGAAGT
GGCCAAGACCTCGCGGCGGAACTCACACAGTACGTC
35612
35613
GTTTCAGACGGACCCTTGGGCGGTTGAAGT
GAAGTCCACCGTATCACTGGACCGCGAAGTTCGGAAA
35679
35680
GTTTCAGACGGACCCTTGGGCGGTTGAAGT
CGACTGAAAGAGTTGTGCGTGTCGAATCATGAGC
35743
35744
GTTTCAGACGGACCCTTGGGCGGTTGAAGT
CCCCGCCGGTACTGCGGGGGCTCCAGCGAGTCGTCTA
35810
35811
GTTTCAGACGGACCCTTGGGCGGTTGAAGT
CCCCGCCGGTACTGCGGGGGCTCCAGCGAGTCGTCTA
35877
35878
GTTTCAGACGGACCCTTGGGCGGTTGAAGT
GGCCCACCGAGTGCTTGTGACCAGCTGCGGCCACCGC
35944
35945
GTTTCAGACGGACCCTTGGGCGGTTGAAGT
CATGCACGACGGCGACGTGTCGGTGCTCAACTGCCT
36010
36011
GTTTCAGACGGACCCTTGGGCGGTTGAAGT
GCCAACACTAGTCACGTCAACAACAGTCCCAAACTG
36076
36077
GTTTCAGACGGACCCTTGGGCGGTTGAAGT
CGACTGTCCACGGTATCGTTTATCCGCGCGTCAACGA
36143
36144
GTTTCAGACGGACCCTTGGGCGGTTGAAGT
GATAGTCACATCAACACTGGTTGTGCCGTTATTGGTTA
36211
36212
GTTTCAGACGGACCCTTGGGCGGTTGAAGT
CTGCCGTTGAAGGTCACTCGTATGTCGTCCACCAGA
36277
36278
GTTTCAGACGGACCCTTGGGCGGTTGAAGT
CCGGTCGACCTGATTTACAACGTGACTGGCCACGAG
36343
36344
GTTTCAGACGGACCCTTGGGCGGTTGAAGT
AGCCAAGCCATCAGGGGATCGTCCGCCGAACCCGT
36408
36409
GTTTCAGACGGACCCTTGGGCGGTTGAAGT
CCGACGAACGGCCCGATTTGGCCGATCTCCCTG
36471
36472
GTTTCAGACGGACCCTTGGGCGGTTGAAGT
ATCATCTGGGGGCCGGAAGTGTGGCTGACCGGCG
36535
36536
GTTTCAGACGGACCCTTGGGCGGTTGAAGC
GACATCCTCGACCACGAAGTCTGGGAGGAAGTCCA
36600
36601
GTTACAGACGGACCCTCGGGTCGTTGAAGC
GAGAACGAGGACGGAGACCTCATCCGACTGTTTTGG
36666
36667
GTTACAGACGGTCCTTTGAGTGGTTTATCG
36696
Left flanking sequence : Till position 35013 (length
bp)
TTTCATCGACCCCCCGGGGGTTGCGGGGGTATTGGCGGTCGACGAAAATAGTGAAGTGAAACCAGGCTAG
AAATAGGCTGTGTCCCGGGAATCGGGCATG
Right flanking sequence : From position 36696 (length
bp)
GGTCTGACCAGCGAGACCGATGACCGCTATCGAAGAAACACATTCAGCTAGCCGTGCTAGAAGTATATGT
GCATGGAGCCATCTAGTCAGAACACAGTCC
Print the CRISPR sequence : From position
bp To position
bp