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CRISPRs details
NC_006462_4
Flanking alignement tool
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NC_006462_4                                                                                                                 
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Strain :
Thermus thermophilus HB8
RefSeq :
NC_006462 (plasmid pTT27 )
CRISPR id :
NC_006462_4
DR consensus (36 bp) :
GTTGCAAGGGATTGAGCCCCGTAAGGGGATTGCGAC
Number of repetitions :
13
Begin Position :
135156
End Position :
136099
135156
GTTGCAAGGGATTGAGCCCCGTAAGGGGATTGCGAC
TGCTCTAATCGGGCCTGTTCGGCTATGGCCTTGGGGCTC
135230
135231
GTTGCAAGGGATTGAGCCCCGTAAGGGGATTGCGAC
ACAACCCGCCCAAAGGGAATGCCGCTAGCCCCAGACACAT
135306
135307
GTTGCAAGGGATTGAGCCCCGTAAGGGGATTGCGAC
CAGTCCCACCCCTCGTGGGGGGCGGCCCTGTCGTCG
135378
135379
GTTGCAAGGGATTGAGCCCCGTAAGGGGATTGCGAC
CGCACCCTCCTTCCGAGCTTCCACCCGGCGTACATGGCC
135453
135454
GTTGCAAGGGATTGAGCCCCGTAAGGGGATTGCGAC
TTCAGCAGACCGAAGTGTCTTCCGTTGCGAACAGTGTAG
135528
135529
GTTGCAAGGGATTGAGCCCCGTAAGGGGATTGCGAC
CCTCATCAGCGCATCTAGAGCCTGAATTATCCTCATTTCTTC
135606
135607
GTTGCAAGGGATTGAGCCCCGTAAGGGGATTGCGAC
GCCATCACCGTGAGGCCGCCCTCCACCAGCTCCCCCTCCA
135682
135683
GTTGCAAGGGATTGAGCCCCGTAAGGGGATTGCGAC
TTTCTTAATTACGAGCCAGTCATTCGGATAAACCATGAGA
135758
135759
GTTGCAAGGGATTGAGCCCCGTAAGGGGATTGCGAC
TGAAAGTTTCGGTGGTCCCCCCCGCCCTCCACCAGCGGA
135833
135834
GTTGCAAGGGATTGAGCCCCGTAAGGGGATTGCGAC
CCGCAGCTGGGGCAAGTGCAACCGCAGTAGCTCATACTCC
135909
135910
GTTGCAAGGGATTGAGCCCCGTAAGGGGATTGCGAC
TTGGCGGTCAGGGTTTGGTACCGCACCGTGTTCGGCGTTA
135985
135986
GTTGCAAGGGATTGAGCCCCGTAAGGGGATTGCGAC
TTCTTGATTATCCTGACCTTGTCCTTCATCTTTGACCTCCTT
136063
136064
GTTGCAAGGGATTGAGCCCCGTAAGGGGATTGCGCC
136099
Left flanking sequence : Till position 135156 (length
bp)
CGTGGTGGCCCGGCAACCGGGGCGGTGGGGCCTCCCTCAGGGGGCAAGATACATGCGACCTAGGCAGACC
TCTTCCCACTCCGTGAGCGGGTATGGCATG
Right flanking sequence : From position 136099 (length
bp)
TCGCGGGGGCCTTTGGCTAGCCTTTTCCCATGGGCAAGCGTCTCTATGCCGTGGCGTACGACATTCCGGA
CGACACTCGCCGGGTGAAGCTGGCCAACCT
Print the CRISPR sequence : From position
bp To position
bp