Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_006823_1                                                                                                                 top


Strain : Azoarcus sp. EbN1 RefSeq :NC_006823 (plasmid 1 )
CRISPR id : NC_006823_1
DR consensus (29 bp) : GTGTTCCCCGCGCATCGCGGGGGTTGAAGNumber of repetitions :9
Begin Position : 55 End Position : 579

55GTGTTCCCCGCGCATCGCGGGGGTTGAAGCGTCAGGTCTGCAACAAAGATCAACCCTACTCG 116
117GTGTTCCCCGCGCATCGCGGGGGTTGAAGGGCTGCGAGGATGGCAGCAACCCGCATTTCAGT 178
179GTGTTCCCCGCGCATCGCGGGGGTTGAAGTGTCTTTTTTGGGTCTTGCTGTTTGCGCGGCTG 240
241GTGTTCCCCGCGCATCGCGGGGGTTGAAGGGCCGACGTTCGGTCAAGAGGCTGGACCCGTCC 302
303GTGTTCCCCGCGCATCGCGGGGGTTGAAGCAAGTAACGACACGCCCACCAGTCGCGCCCCCG 364
365GTGTTCCCCGCGCATCGCGGGGGTTGAAGAATGCCCTCTTGCGTCTCACGACGTTCGAGGCC 426
427GTGTTCCCCGCGCATCGCGGGGGTTGAAGGATCACACGCCGCTCGATTGGATCGTCATCTGC 488
489GTGTTCCCCGCGCATCGCGGGGGTTGAAGGGTGGAACGAGCCTTCTCCATGCCCCCTCCGGC 550
551GTGTTCCCCGCGCATCGCGGGGGTTGAAG579
Left flanking sequence : Till position 55 (length bp)
CACCATCACCCAGGGTTGAAGTGCCTTGCGGCAAGAGCTCACGATCTCGACGAG
Right flanking sequence : From position 579 (length bp)
TGACCCAGTGTTGCCGGCTGCCAGAATCCGCACAAATCCGGTGTCGTTAAACGGCGGCGTCGAGCGGGCG
CCGCCGGCGCGGTAAGCGTCACGAGGGCCG
Print the CRISPR sequence : From position bp To position bp